Protein–RNA interactions for Protein: O70174

Chrna4, Neuronal acetylcholine receptor subunit alpha-4, mousemouse

Predictions only

Length 629 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna4O70174 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Chrna4O70174 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC20.78■□□□□ 0.92
Chrna4O70174 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Chrna4O70174 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Chrna4O70174 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC20.77■□□□□ 0.92
Chrna4O70174 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Chrna4O70174 Gm9959-201ENSMUST00000068277 390 ntBASIC20.77■□□□□ 0.92
Chrna4O70174 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Chrna4O70174 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC20.77■□□□□ 0.92
Chrna4O70174 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Chrna4O70174 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.91
Chrna4O70174 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Chrna4O70174 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Chrna4O70174 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Chrna4O70174 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Chrna4O70174 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
Chrna4O70174 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Chrna4O70174 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Chrna4O70174 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Chrna4O70174 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC20.76■□□□□ 0.91
Chrna4O70174 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC20.75■□□□□ 0.91
Chrna4O70174 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Chrna4O70174 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC20.75■□□□□ 0.91
Chrna4O70174 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Chrna4O70174 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Chrna4O70174 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Chrna4O70174 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Chrna4O70174 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC20.74■□□□□ 0.91
Chrna4O70174 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Chrna4O70174 Etf1-202ENSMUST00000180351 108 ntBASIC20.74■□□□□ 0.91
Chrna4O70174 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC20.74■□□□□ 0.91
Chrna4O70174 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Chrna4O70174 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Chrna4O70174 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
Chrna4O70174 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Chrna4O70174 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Chrna4O70174 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Chrna4O70174 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Chrna4O70174 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Chrna4O70174 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Chrna4O70174 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Chrna4O70174 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Chrna4O70174 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Chrna4O70174 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Chrna4O70174 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Chrna4O70174 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Chrna4O70174 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Chrna4O70174 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Chrna4O70174 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Chrna4O70174 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Chrna4O70174 Gm7417-201ENSMUST00000192950 473 ntBASIC20.71■□□□□ 0.91
Chrna4O70174 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Chrna4O70174 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Chrna4O70174 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Chrna4O70174 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Chrna4O70174 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Chrna4O70174 AC122428.2-201ENSMUST00000216321 1832 ntBASIC20.71■□□□□ 0.91
Chrna4O70174 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Chrna4O70174 Snhg20-203ENSMUST00000182811 2153 ntBASIC20.7■□□□□ 0.91
Chrna4O70174 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Chrna4O70174 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Chrna4O70174 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Chrna4O70174 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Chrna4O70174 Gm43006-201ENSMUST00000197702 1602 ntBASIC20.7■□□□□ 0.9
Chrna4O70174 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Chrna4O70174 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Chrna4O70174 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Chrna4O70174 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Chrna4O70174 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Chrna4O70174 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Chrna4O70174 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Chrna4O70174 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Chrna4O70174 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Chrna4O70174 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Chrna4O70174 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Chrna4O70174 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC20.69■□□□□ 0.9
Chrna4O70174 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Chrna4O70174 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Chrna4O70174 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
Chrna4O70174 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Chrna4O70174 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Chrna4O70174 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Chrna4O70174 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Chrna4O70174 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC20.68■□□□□ 0.9
Chrna4O70174 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Chrna4O70174 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Chrna4O70174 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Chrna4O70174 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC20.67■□□□□ 0.9
Chrna4O70174 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC20.67■□□□□ 0.9
Chrna4O70174 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Chrna4O70174 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Chrna4O70174 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Chrna4O70174 Gm14117-201ENSMUST00000122417 843 ntBASIC20.66■□□□□ 0.9
Chrna4O70174 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Chrna4O70174 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC20.66■□□□□ 0.9
Chrna4O70174 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC20.66■□□□□ 0.9
Chrna4O70174 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Chrna4O70174 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Chrna4O70174 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Chrna4O70174 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 110.2 ms