Protein–RNA interactions for Protein: O70137

Alx3, Homeobox protein aristaless-like 3, mousemouse

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx3O70137 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC18.59■□□□□ 0.57
Alx3O70137 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC18.59■□□□□ 0.57
Alx3O70137 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Alx3O70137 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Alx3O70137 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC18.59■□□□□ 0.57
Alx3O70137 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
Alx3O70137 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Alx3O70137 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Alx3O70137 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Alx3O70137 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Alx3O70137 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
Alx3O70137 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Alx3O70137 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.57
Alx3O70137 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Alx3O70137 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Alx3O70137 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC18.58■□□□□ 0.57
Alx3O70137 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Alx3O70137 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC18.58■□□□□ 0.56
Alx3O70137 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Alx3O70137 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Alx3O70137 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Alx3O70137 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Alx3O70137 Kdm3b-204ENSMUST00000224715 2032 ntBASIC18.57■□□□□ 0.56
Alx3O70137 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Alx3O70137 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Alx3O70137 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Alx3O70137 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Alx3O70137 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC18.57■□□□□ 0.56
Alx3O70137 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Alx3O70137 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Alx3O70137 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Alx3O70137 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Alx3O70137 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Alx3O70137 Cap2-205ENSMUST00000225824 1634 ntBASIC18.56■□□□□ 0.56
Alx3O70137 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Alx3O70137 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Alx3O70137 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Alx3O70137 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Alx3O70137 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC18.56■□□□□ 0.56
Alx3O70137 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Alx3O70137 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Alx3O70137 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Alx3O70137 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Alx3O70137 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Alx3O70137 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Alx3O70137 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Alx3O70137 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Alx3O70137 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Alx3O70137 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Alx3O70137 Gm45444-201ENSMUST00000211394 898 ntBASIC18.55■□□□□ 0.56
Alx3O70137 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC18.55■□□□□ 0.56
Alx3O70137 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Alx3O70137 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Alx3O70137 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC18.55■□□□□ 0.56
Alx3O70137 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Alx3O70137 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Alx3O70137 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Alx3O70137 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Alx3O70137 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Alx3O70137 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Alx3O70137 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Alx3O70137 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Alx3O70137 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Alx3O70137 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Alx3O70137 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Alx3O70137 Nsd1-203ENSMUST00000224156 1149 ntBASIC18.53■□□□□ 0.56
Alx3O70137 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Alx3O70137 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Alx3O70137 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Alx3O70137 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Alx3O70137 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Alx3O70137 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC18.53■□□□□ 0.56
Alx3O70137 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.56
Alx3O70137 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Alx3O70137 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Alx3O70137 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Alx3O70137 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Alx3O70137 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Alx3O70137 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Alx3O70137 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Alx3O70137 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Alx3O70137 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Alx3O70137 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Alx3O70137 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Alx3O70137 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Alx3O70137 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Alx3O70137 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
Alx3O70137 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Alx3O70137 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Alx3O70137 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC18.5■□□□□ 0.55
Alx3O70137 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC18.5■□□□□ 0.55
Alx3O70137 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Alx3O70137 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Alx3O70137 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC18.5■□□□□ 0.55
Alx3O70137 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC18.5■□□□□ 0.55
Alx3O70137 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Alx3O70137 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Alx3O70137 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Alx3O70137 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Alx3O70137 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 17.6 ms