Protein–RNA interactions for Protein: O55241

Hcrt, Orexin, mousemouse

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HcrtO55241 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
HcrtO55241 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
HcrtO55241 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
HcrtO55241 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
HcrtO55241 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
HcrtO55241 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
HcrtO55241 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
HcrtO55241 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
HcrtO55241 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
HcrtO55241 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC20.57■□□□□ 0.88
HcrtO55241 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC20.57■□□□□ 0.88
HcrtO55241 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC20.57■□□□□ 0.88
HcrtO55241 Hsf1-207ENSMUST00000228371 2102 ntBASIC20.57■□□□□ 0.88
HcrtO55241 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
HcrtO55241 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
HcrtO55241 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
HcrtO55241 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC20.56■□□□□ 0.88
HcrtO55241 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
HcrtO55241 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC20.56■□□□□ 0.88
HcrtO55241 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
HcrtO55241 Gm5131-201ENSMUST00000212776 1238 ntBASIC20.56■□□□□ 0.88
HcrtO55241 Gm40881-201ENSMUST00000223397 166 ntBASIC20.56■□□□□ 0.88
HcrtO55241 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
HcrtO55241 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
HcrtO55241 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
HcrtO55241 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
HcrtO55241 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
HcrtO55241 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
HcrtO55241 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
HcrtO55241 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
HcrtO55241 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
HcrtO55241 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
HcrtO55241 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
HcrtO55241 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
HcrtO55241 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
HcrtO55241 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
HcrtO55241 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
HcrtO55241 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC20.55■□□□□ 0.88
HcrtO55241 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
HcrtO55241 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
HcrtO55241 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
HcrtO55241 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
HcrtO55241 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
HcrtO55241 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
HcrtO55241 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
HcrtO55241 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC20.54■□□□□ 0.88
HcrtO55241 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
HcrtO55241 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC20.54■□□□□ 0.88
HcrtO55241 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
HcrtO55241 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC20.54■□□□□ 0.88
HcrtO55241 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
HcrtO55241 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC20.54■□□□□ 0.88
HcrtO55241 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
HcrtO55241 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
HcrtO55241 Gm43006-201ENSMUST00000197702 1602 ntBASIC20.53■□□□□ 0.88
HcrtO55241 AC122428.2-201ENSMUST00000216321 1832 ntBASIC20.53■□□□□ 0.88
HcrtO55241 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC20.53■□□□□ 0.88
HcrtO55241 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC20.53■□□□□ 0.88
HcrtO55241 Gm42501-201ENSMUST00000200220 1026 ntBASIC20.53■□□□□ 0.88
HcrtO55241 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
HcrtO55241 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
HcrtO55241 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
HcrtO55241 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC20.53■□□□□ 0.88
HcrtO55241 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
HcrtO55241 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC20.52■□□□□ 0.88
HcrtO55241 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
HcrtO55241 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC20.52■□□□□ 0.88
HcrtO55241 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC20.52■□□□□ 0.88
HcrtO55241 AC093043.1-201ENSMUST00000226700 898 ntBASIC20.52■□□□□ 0.88
HcrtO55241 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
HcrtO55241 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
HcrtO55241 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
HcrtO55241 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
HcrtO55241 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
HcrtO55241 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
HcrtO55241 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC20.51■□□□□ 0.87
HcrtO55241 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
HcrtO55241 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
HcrtO55241 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
HcrtO55241 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
HcrtO55241 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
HcrtO55241 Gm20634-201ENSMUST00000090779 2956 ntBASIC20.5■□□□□ 0.87
HcrtO55241 Gm9959-201ENSMUST00000068277 390 ntBASIC20.5■□□□□ 0.87
HcrtO55241 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
HcrtO55241 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC20.5■□□□□ 0.87
HcrtO55241 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
HcrtO55241 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
HcrtO55241 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC20.49■□□□□ 0.87
HcrtO55241 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
HcrtO55241 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
HcrtO55241 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
HcrtO55241 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
HcrtO55241 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
HcrtO55241 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
HcrtO55241 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
HcrtO55241 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
HcrtO55241 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC20.48■□□□□ 0.87
HcrtO55241 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
HcrtO55241 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
HcrtO55241 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC20.48■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms