Protein–RNA interactions for Protein: O09039

Sh2b3, SH2B adapter protein 3, mousemouse

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2b3O09039 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Sh2b3O09039 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Sh2b3O09039 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Sh2b3O09039 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Sh2b3O09039 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Sh2b3O09039 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Sh2b3O09039 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Sh2b3O09039 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC18.23■□□□□ 0.51
Sh2b3O09039 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Sh2b3O09039 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Sh2b3O09039 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Sh2b3O09039 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Sh2b3O09039 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Sh2b3O09039 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Sh2b3O09039 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Sh2b3O09039 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Sh2b3O09039 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Sh2b3O09039 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Sh2b3O09039 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Sh2b3O09039 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Sh2b3O09039 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC18.22■□□□□ 0.51
Sh2b3O09039 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Sh2b3O09039 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC18.22■□□□□ 0.51
Sh2b3O09039 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Sh2b3O09039 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Sh2b3O09039 Gm10620-201ENSMUST00000098379 1332 ntBASIC18.22■□□□□ 0.51
Sh2b3O09039 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Sh2b3O09039 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Sh2b3O09039 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Sh2b3O09039 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Sh2b3O09039 Appbp2os-202ENSMUST00000206972 447 ntBASIC18.21■□□□□ 0.51
Sh2b3O09039 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Sh2b3O09039 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Sh2b3O09039 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Sh2b3O09039 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Sh2b3O09039 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Sh2b3O09039 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC18.2■□□□□ 0.5
Sh2b3O09039 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Sh2b3O09039 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Sh2b3O09039 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Sh2b3O09039 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Sh2b3O09039 Gm43403-201ENSMUST00000198011 1786 ntBASIC18.19■□□□□ 0.5
Sh2b3O09039 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Sh2b3O09039 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Sh2b3O09039 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC18.19■□□□□ 0.5
Sh2b3O09039 Gm12821-201ENSMUST00000120022 600 ntBASIC18.19■□□□□ 0.5
Sh2b3O09039 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC18.19■□□□□ 0.5
Sh2b3O09039 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Sh2b3O09039 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Sh2b3O09039 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Sh2b3O09039 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Sh2b3O09039 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Sh2b3O09039 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Sh2b3O09039 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Sh2b3O09039 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Sh2b3O09039 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Sh2b3O09039 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Sh2b3O09039 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Sh2b3O09039 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Sh2b3O09039 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC18.18■□□□□ 0.5
Sh2b3O09039 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC18.18■□□□□ 0.5
Sh2b3O09039 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC18.18■□□□□ 0.5
Sh2b3O09039 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Sh2b3O09039 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Sh2b3O09039 Gm38160-201ENSMUST00000193090 2499 ntBASIC18.17■□□□□ 0.5
Sh2b3O09039 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Sh2b3O09039 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Sh2b3O09039 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Sh2b3O09039 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Sh2b3O09039 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Sh2b3O09039 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Sh2b3O09039 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Sh2b3O09039 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Sh2b3O09039 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Sh2b3O09039 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC18.16■□□□□ 0.5
Sh2b3O09039 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Sh2b3O09039 AC164883.3-201ENSMUST00000227396 1774 ntBASIC18.16■□□□□ 0.5
Sh2b3O09039 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Sh2b3O09039 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Sh2b3O09039 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC18.16■□□□□ 0.5
Sh2b3O09039 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Sh2b3O09039 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Sh2b3O09039 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Sh2b3O09039 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Sh2b3O09039 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Sh2b3O09039 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Sh2b3O09039 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC18.15■□□□□ 0.5
Sh2b3O09039 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Sh2b3O09039 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC18.15■□□□□ 0.5
Sh2b3O09039 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC18.15■□□□□ 0.5
Sh2b3O09039 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Sh2b3O09039 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Sh2b3O09039 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC18.15■□□□□ 0.5
Sh2b3O09039 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Sh2b3O09039 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC18.14■□□□□ 0.5
Sh2b3O09039 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Sh2b3O09039 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Sh2b3O09039 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Sh2b3O09039 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC18.14■□□□□ 0.49
Sh2b3O09039 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC18.14■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms