Protein–RNA interactions for Protein: O08852

Pkd1, Polycystin-1, mousemouse

Predictions only

Length 4,293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pkd1O08852 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Pkd1O08852 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Pkd1O08852 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC13.37□□□□□ -0.27
Pkd1O08852 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pkd1O08852 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pkd1O08852 AC165080.2-201ENSMUST00000217491 1530 ntBASIC13.36□□□□□ -0.27
Pkd1O08852 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pkd1O08852 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Pkd1O08852 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC13.36□□□□□ -0.27
Pkd1O08852 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pkd1O08852 Gm22325-201ENSMUST00000158904 308 ntBASIC13.36□□□□□ -0.27
Pkd1O08852 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Pkd1O08852 Smad6-203ENSMUST00000179458 273 ntBASIC13.35□□□□□ -0.27
Pkd1O08852 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC13.35□□□□□ -0.27
Pkd1O08852 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Pkd1O08852 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC13.35□□□□□ -0.27
Pkd1O08852 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Pkd1O08852 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pkd1O08852 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC13.35□□□□□ -0.27
Pkd1O08852 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC13.35□□□□□ -0.27
Pkd1O08852 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pkd1O08852 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pkd1O08852 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Pkd1O08852 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC13.34□□□□□ -0.27
Pkd1O08852 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pkd1O08852 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pkd1O08852 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Pkd1O08852 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pkd1O08852 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Pkd1O08852 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC13.34□□□□□ -0.27
Pkd1O08852 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC13.33□□□□□ -0.27
Pkd1O08852 AC166356.1-201ENSMUST00000228236 1426 ntBASIC13.33□□□□□ -0.27
Pkd1O08852 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC13.33□□□□□ -0.27
Pkd1O08852 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pkd1O08852 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pkd1O08852 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pkd1O08852 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pkd1O08852 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pkd1O08852 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Pkd1O08852 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC13.33□□□□□ -0.28
Pkd1O08852 Gm10252-201ENSMUST00000209541 832 ntBASIC13.33□□□□□ -0.28
Pkd1O08852 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pkd1O08852 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC13.33□□□□□ -0.28
Pkd1O08852 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pkd1O08852 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pkd1O08852 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pkd1O08852 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC13.33□□□□□ -0.28
Pkd1O08852 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pkd1O08852 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Pkd1O08852 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pkd1O08852 Gm10602-201ENSMUST00000098239 609 ntBASIC13.33□□□□□ -0.28
Pkd1O08852 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Pkd1O08852 Gm10653-202ENSMUST00000139570 835 ntBASIC13.32□□□□□ -0.28
Pkd1O08852 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Pkd1O08852 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Pkd1O08852 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pkd1O08852 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Pkd1O08852 Gm44949-201ENSMUST00000206423 1450 ntBASIC13.31□□□□□ -0.28
Pkd1O08852 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Pkd1O08852 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pkd1O08852 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pkd1O08852 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pkd1O08852 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pkd1O08852 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pkd1O08852 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC13.31□□□□□ -0.28
Pkd1O08852 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Pkd1O08852 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC13.31□□□□□ -0.28
Pkd1O08852 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pkd1O08852 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Pkd1O08852 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Pkd1O08852 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pkd1O08852 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pkd1O08852 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pkd1O08852 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pkd1O08852 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
Pkd1O08852 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pkd1O08852 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pkd1O08852 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pkd1O08852 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pkd1O08852 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC13.29□□□□□ -0.28
Pkd1O08852 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Pkd1O08852 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pkd1O08852 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Pkd1O08852 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pkd1O08852 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Pkd1O08852 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC13.29□□□□□ -0.28
Pkd1O08852 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pkd1O08852 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pkd1O08852 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Pkd1O08852 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Pkd1O08852 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC13.29□□□□□ -0.28
Pkd1O08852 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pkd1O08852 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pkd1O08852 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pkd1O08852 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pkd1O08852 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pkd1O08852 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pkd1O08852 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC13.28□□□□□ -0.28
Pkd1O08852 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Pkd1O08852 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 14.5 ms