Protein–RNA interactions for Protein: O08848

Trove2, 60 kDa SS-A/Ro ribonucleoprotein, mousemouse

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trove2O08848 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Trove2O08848 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
Trove2O08848 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Trove2O08848 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
Trove2O08848 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Trove2O08848 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Trove2O08848 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Trove2O08848 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Trove2O08848 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Trove2O08848 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Trove2O08848 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
Trove2O08848 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Trove2O08848 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Trove2O08848 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Trove2O08848 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Trove2O08848 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
Trove2O08848 Gm10420-201ENSMUST00000121713 882 ntBASIC20.9■□□□□ 0.94
Trove2O08848 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC20.9■□□□□ 0.94
Trove2O08848 Snhg20-203ENSMUST00000182811 2153 ntBASIC20.9■□□□□ 0.94
Trove2O08848 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC20.9■□□□□ 0.94
Trove2O08848 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.94
Trove2O08848 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.94
Trove2O08848 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Trove2O08848 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Trove2O08848 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
Trove2O08848 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Trove2O08848 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC20.88■□□□□ 0.93
Trove2O08848 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
Trove2O08848 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Trove2O08848 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Trove2O08848 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC20.88■□□□□ 0.93
Trove2O08848 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Trove2O08848 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Trove2O08848 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Trove2O08848 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
Trove2O08848 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
Trove2O08848 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Trove2O08848 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Trove2O08848 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Trove2O08848 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Trove2O08848 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Trove2O08848 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Trove2O08848 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
Trove2O08848 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Trove2O08848 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Trove2O08848 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
Trove2O08848 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
Trove2O08848 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Trove2O08848 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Trove2O08848 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Trove2O08848 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Trove2O08848 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC20.85■□□□□ 0.93
Trove2O08848 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Trove2O08848 Gm43592-201ENSMUST00000196922 1165 ntBASIC20.85■□□□□ 0.93
Trove2O08848 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC20.85■□□□□ 0.93
Trove2O08848 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Trove2O08848 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
Trove2O08848 Cap2-205ENSMUST00000225824 1634 ntBASIC20.85■□□□□ 0.93
Trove2O08848 Golph3-202ENSMUST00000226517 2359 ntBASIC20.85■□□□□ 0.93
Trove2O08848 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Trove2O08848 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Trove2O08848 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Trove2O08848 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC20.84■□□□□ 0.93
Trove2O08848 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
Trove2O08848 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
Trove2O08848 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Trove2O08848 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Trove2O08848 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Trove2O08848 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Trove2O08848 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Trove2O08848 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC20.83■□□□□ 0.93
Trove2O08848 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Trove2O08848 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
Trove2O08848 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Trove2O08848 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Trove2O08848 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Trove2O08848 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Trove2O08848 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Trove2O08848 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Trove2O08848 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
Trove2O08848 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Trove2O08848 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Trove2O08848 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Trove2O08848 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Trove2O08848 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC20.81■□□□□ 0.92
Trove2O08848 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Trove2O08848 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Trove2O08848 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Trove2O08848 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Trove2O08848 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Trove2O08848 Gm5067-201ENSMUST00000170449 1009 ntBASIC20.81■□□□□ 0.92
Trove2O08848 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Trove2O08848 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC20.81■□□□□ 0.92
Trove2O08848 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Trove2O08848 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Trove2O08848 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC20.8■□□□□ 0.92
Trove2O08848 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trove2O08848 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trove2O08848 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC20.8■□□□□ 0.92
Trove2O08848 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms