Protein–RNA interactions for Protein: O08603

Raet1b, Retinoic acid early-inducible protein 1-beta, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raet1bO08603 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Raet1bO08603 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Raet1bO08603 Gm4430-201ENSMUST00000192413 1943 ntBASIC18.23■□□□□ 0.51
Raet1bO08603 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Raet1bO08603 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Raet1bO08603 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Raet1bO08603 Gm5522-201ENSMUST00000189483 1242 ntBASIC18.22■□□□□ 0.51
Raet1bO08603 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Raet1bO08603 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Raet1bO08603 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC18.22■□□□□ 0.51
Raet1bO08603 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Raet1bO08603 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Raet1bO08603 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Raet1bO08603 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Raet1bO08603 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Raet1bO08603 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Raet1bO08603 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Raet1bO08603 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC18.2■□□□□ 0.5
Raet1bO08603 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Raet1bO08603 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Raet1bO08603 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Raet1bO08603 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Raet1bO08603 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Raet1bO08603 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Raet1bO08603 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Raet1bO08603 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Raet1bO08603 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Raet1bO08603 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Raet1bO08603 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC18.19■□□□□ 0.5
Raet1bO08603 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC18.19■□□□□ 0.5
Raet1bO08603 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Raet1bO08603 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Raet1bO08603 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC18.19■□□□□ 0.5
Raet1bO08603 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Raet1bO08603 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Raet1bO08603 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Raet1bO08603 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC18.18■□□□□ 0.5
Raet1bO08603 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC18.18■□□□□ 0.5
Raet1bO08603 Gm40881-201ENSMUST00000223397 166 ntBASIC18.18■□□□□ 0.5
Raet1bO08603 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Raet1bO08603 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Raet1bO08603 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Raet1bO08603 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Raet1bO08603 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Raet1bO08603 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Raet1bO08603 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Raet1bO08603 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC18.17■□□□□ 0.5
Raet1bO08603 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Raet1bO08603 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Raet1bO08603 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
Raet1bO08603 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Raet1bO08603 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Raet1bO08603 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Raet1bO08603 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Raet1bO08603 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Raet1bO08603 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Raet1bO08603 Gm15546-201ENSMUST00000122095 826 ntBASIC18.16■□□□□ 0.5
Raet1bO08603 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC18.16■□□□□ 0.5
Raet1bO08603 Gm42501-201ENSMUST00000200220 1026 ntBASIC18.16■□□□□ 0.5
Raet1bO08603 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Raet1bO08603 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Raet1bO08603 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Raet1bO08603 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Raet1bO08603 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Raet1bO08603 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Raet1bO08603 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Raet1bO08603 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Raet1bO08603 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Raet1bO08603 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Raet1bO08603 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC18.15■□□□□ 0.5
Raet1bO08603 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Raet1bO08603 Gm5131-201ENSMUST00000212776 1238 ntBASIC18.15■□□□□ 0.5
Raet1bO08603 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Raet1bO08603 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Raet1bO08603 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Raet1bO08603 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC18.14■□□□□ 0.49
Raet1bO08603 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Raet1bO08603 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Raet1bO08603 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Raet1bO08603 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Raet1bO08603 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Raet1bO08603 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Raet1bO08603 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Raet1bO08603 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Raet1bO08603 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Raet1bO08603 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Raet1bO08603 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC18.13■□□□□ 0.49
Raet1bO08603 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Raet1bO08603 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC18.13■□□□□ 0.49
Raet1bO08603 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Raet1bO08603 AC122428.2-201ENSMUST00000216321 1832 ntBASIC18.13■□□□□ 0.49
Raet1bO08603 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC18.13■□□□□ 0.49
Raet1bO08603 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Raet1bO08603 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC18.13■□□□□ 0.49
Raet1bO08603 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC18.13■□□□□ 0.49
Raet1bO08603 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC18.13■□□□□ 0.49
Raet1bO08603 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Raet1bO08603 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Raet1bO08603 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Raet1bO08603 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 14.5 ms