Protein–RNA interactions for Protein: J3QPF1

Gm10553, Predicted gene 10553, mousemouse

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm10553J3QPF1 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Gm10553J3QPF1 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Gm10553J3QPF1 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Gm10553J3QPF1 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC15.69■□□□□ 0.1
Gm10553J3QPF1 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Gm10553J3QPF1 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Gm10553J3QPF1 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Gm10553J3QPF1 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Gm10553J3QPF1 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Gm10553J3QPF1 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Gm10553J3QPF1 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Gm10553J3QPF1 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Gm10553J3QPF1 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Gm10553J3QPF1 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Gm10553J3QPF1 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Gm10553J3QPF1 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Gm10553J3QPF1 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Gm10553J3QPF1 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Gm10553J3QPF1 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Gm10553J3QPF1 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Gm10553J3QPF1 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Gm10553J3QPF1 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Gm10553J3QPF1 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Gm10553J3QPF1 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC15.68■□□□□ 0.1
Gm10553J3QPF1 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Gm10553J3QPF1 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Gm10553J3QPF1 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Gm10553J3QPF1 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC15.67■□□□□ 0.1
Gm10553J3QPF1 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Gm10553J3QPF1 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC15.67■□□□□ 0.1
Gm10553J3QPF1 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Gm10553J3QPF1 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Gm10553J3QPF1 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Gm10553J3QPF1 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Gm10553J3QPF1 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Gm10553J3QPF1 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Gm10553J3QPF1 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
Gm10553J3QPF1 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC15.66■□□□□ 0.1
Gm10553J3QPF1 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Gm10553J3QPF1 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC15.66■□□□□ 0.1
Gm10553J3QPF1 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Gm10553J3QPF1 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Gm10553J3QPF1 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC15.66■□□□□ 0.1
Gm10553J3QPF1 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC15.66■□□□□ 0.1
Gm10553J3QPF1 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Gm10553J3QPF1 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Gm10553J3QPF1 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
Gm10553J3QPF1 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC15.66■□□□□ 0.1
Gm10553J3QPF1 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Gm10553J3QPF1 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Gm10553J3QPF1 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Gm10553J3QPF1 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Gm10553J3QPF1 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Gm10553J3QPF1 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Gm10553J3QPF1 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC15.65■□□□□ 0.1
Gm10553J3QPF1 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC15.65■□□□□ 0.1
Gm10553J3QPF1 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Gm10553J3QPF1 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Gm10553J3QPF1 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Gm10553J3QPF1 Gm12504-201ENSMUST00000120860 2231 ntBASIC15.65■□□□□ 0.1
Gm10553J3QPF1 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Gm10553J3QPF1 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Gm10553J3QPF1 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Gm10553J3QPF1 Gm44949-201ENSMUST00000206423 1450 ntBASIC15.65■□□□□ 0.1
Gm10553J3QPF1 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Gm10553J3QPF1 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Gm10553J3QPF1 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Gm10553J3QPF1 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC15.64■□□□□ 0.09
Gm10553J3QPF1 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Gm10553J3QPF1 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Gm10553J3QPF1 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Gm10553J3QPF1 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Gm10553J3QPF1 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC15.63■□□□□ 0.09
Gm10553J3QPF1 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC15.63■□□□□ 0.09
Gm10553J3QPF1 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Gm10553J3QPF1 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Gm10553J3QPF1 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
Gm10553J3QPF1 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Gm10553J3QPF1 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Gm10553J3QPF1 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Gm10553J3QPF1 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC15.62■□□□□ 0.09
Gm10553J3QPF1 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Gm10553J3QPF1 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Gm10553J3QPF1 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC15.62■□□□□ 0.09
Gm10553J3QPF1 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC15.62■□□□□ 0.09
Gm10553J3QPF1 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Gm10553J3QPF1 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Gm10553J3QPF1 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Gm10553J3QPF1 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Gm10553J3QPF1 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Gm10553J3QPF1 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Gm10553J3QPF1 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Gm10553J3QPF1 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Gm10553J3QPF1 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Gm10553J3QPF1 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Gm10553J3QPF1 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC15.61■□□□□ 0.09
Gm10553J3QPF1 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Gm10553J3QPF1 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Gm10553J3QPF1 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC15.61■□□□□ 0.09
Gm10553J3QPF1 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC15.61■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 16.4 ms