Protein–RNA interactions for Protein: J3QP37

Smim22, MCG1038270, isoform CRA_a, mousemouse

Predictions only

Length 91 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim22J3QP37 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Smim22J3QP37 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Smim22J3QP37 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Smim22J3QP37 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC20.67■□□□□ 0.9
Smim22J3QP37 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Smim22J3QP37 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC20.67■□□□□ 0.9
Smim22J3QP37 Krtap5-1-202ENSMUST00000188274 742 ntBASIC20.67■□□□□ 0.9
Smim22J3QP37 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Smim22J3QP37 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Smim22J3QP37 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Smim22J3QP37 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Smim22J3QP37 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Smim22J3QP37 Gm11643-201ENSMUST00000119578 864 ntBASIC20.66■□□□□ 0.9
Smim22J3QP37 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC20.66■□□□□ 0.9
Smim22J3QP37 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC20.66■□□□□ 0.9
Smim22J3QP37 Gm4419-202ENSMUST00000226239 1431 ntBASIC20.66■□□□□ 0.9
Smim22J3QP37 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Smim22J3QP37 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Smim22J3QP37 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Smim22J3QP37 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Smim22J3QP37 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC20.65■□□□□ 0.9
Smim22J3QP37 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Smim22J3QP37 Gm43759-201ENSMUST00000196925 1261 ntBASIC20.65■□□□□ 0.9
Smim22J3QP37 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Smim22J3QP37 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Smim22J3QP37 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Smim22J3QP37 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Smim22J3QP37 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
Smim22J3QP37 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC20.64■□□□□ 0.89
Smim22J3QP37 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Smim22J3QP37 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Smim22J3QP37 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Smim22J3QP37 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Smim22J3QP37 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Smim22J3QP37 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Smim22J3QP37 Krt8-ps-201ENSMUST00000208495 945 ntBASIC20.63■□□□□ 0.89
Smim22J3QP37 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Smim22J3QP37 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Smim22J3QP37 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Smim22J3QP37 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Smim22J3QP37 Gm10819-201ENSMUST00000099988 561 ntBASIC20.62■□□□□ 0.89
Smim22J3QP37 Gm6085-201ENSMUST00000182774 1470 ntBASIC20.62■□□□□ 0.89
Smim22J3QP37 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Smim22J3QP37 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Smim22J3QP37 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC20.61■□□□□ 0.89
Smim22J3QP37 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Smim22J3QP37 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Smim22J3QP37 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Smim22J3QP37 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Smim22J3QP37 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Smim22J3QP37 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Smim22J3QP37 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Smim22J3QP37 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Smim22J3QP37 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC20.6■□□□□ 0.89
Smim22J3QP37 AC135637.1-201ENSMUST00000227750 365 ntBASIC20.6■□□□□ 0.89
Smim22J3QP37 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Smim22J3QP37 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Smim22J3QP37 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC20.59■□□□□ 0.89
Smim22J3QP37 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Smim22J3QP37 Gm8770-201ENSMUST00000121113 1109 ntBASIC20.59■□□□□ 0.89
Smim22J3QP37 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Smim22J3QP37 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Smim22J3QP37 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Smim22J3QP37 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Smim22J3QP37 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Smim22J3QP37 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Smim22J3QP37 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Smim22J3QP37 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Smim22J3QP37 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Smim22J3QP37 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Smim22J3QP37 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
Smim22J3QP37 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC20.58■□□□□ 0.89
Smim22J3QP37 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
Smim22J3QP37 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
Smim22J3QP37 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC20.58■□□□□ 0.88
Smim22J3QP37 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Smim22J3QP37 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC20.58■□□□□ 0.88
Smim22J3QP37 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
Smim22J3QP37 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
Smim22J3QP37 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Smim22J3QP37 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Smim22J3QP37 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Smim22J3QP37 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
Smim22J3QP37 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Smim22J3QP37 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Smim22J3QP37 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Smim22J3QP37 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Smim22J3QP37 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Smim22J3QP37 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Smim22J3QP37 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Smim22J3QP37 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Smim22J3QP37 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Smim22J3QP37 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Smim22J3QP37 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Smim22J3QP37 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Smim22J3QP37 Gm7199-201ENSMUST00000118327 1485 ntBASIC20.56■□□□□ 0.88
Smim22J3QP37 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC20.56■□□□□ 0.88
Smim22J3QP37 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Smim22J3QP37 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Smim22J3QP37 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 14.6 ms