Protein–RNA interactions for Protein: J3QMG8

Trav13d-3, T cell receptor alpha variable 13D-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-3J3QMG8 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC18.11■□□□□ 0.49
Trav13d-3J3QMG8 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC18.11■□□□□ 0.49
Trav13d-3J3QMG8 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trav13d-3J3QMG8 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Trav13d-3J3QMG8 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trav13d-3J3QMG8 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trav13d-3J3QMG8 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Trav13d-3J3QMG8 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Trav13d-3J3QMG8 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trav13d-3J3QMG8 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trav13d-3J3QMG8 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC18.1■□□□□ 0.49
Trav13d-3J3QMG8 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trav13d-3J3QMG8 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trav13d-3J3QMG8 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC18.09■□□□□ 0.49
Trav13d-3J3QMG8 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trav13d-3J3QMG8 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC18.09■□□□□ 0.49
Trav13d-3J3QMG8 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trav13d-3J3QMG8 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Trav13d-3J3QMG8 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Trav13d-3J3QMG8 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Trav13d-3J3QMG8 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Trav13d-3J3QMG8 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trav13d-3J3QMG8 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trav13d-3J3QMG8 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trav13d-3J3QMG8 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC18.07■□□□□ 0.48
Trav13d-3J3QMG8 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trav13d-3J3QMG8 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC18.07■□□□□ 0.48
Trav13d-3J3QMG8 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC18.07■□□□□ 0.48
Trav13d-3J3QMG8 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC18.07■□□□□ 0.48
Trav13d-3J3QMG8 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trav13d-3J3QMG8 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC18.07■□□□□ 0.48
Trav13d-3J3QMG8 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trav13d-3J3QMG8 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trav13d-3J3QMG8 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC18.07■□□□□ 0.48
Trav13d-3J3QMG8 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trav13d-3J3QMG8 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trav13d-3J3QMG8 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trav13d-3J3QMG8 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trav13d-3J3QMG8 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trav13d-3J3QMG8 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trav13d-3J3QMG8 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trav13d-3J3QMG8 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trav13d-3J3QMG8 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trav13d-3J3QMG8 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trav13d-3J3QMG8 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trav13d-3J3QMG8 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trav13d-3J3QMG8 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Trav13d-3J3QMG8 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trav13d-3J3QMG8 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trav13d-3J3QMG8 AC122428.2-201ENSMUST00000216321 1832 ntBASIC18.05■□□□□ 0.48
Trav13d-3J3QMG8 AC124392.1-201ENSMUST00000225172 5324 ntBASIC18.05■□□□□ 0.48
Trav13d-3J3QMG8 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trav13d-3J3QMG8 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trav13d-3J3QMG8 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trav13d-3J3QMG8 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Trav13d-3J3QMG8 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trav13d-3J3QMG8 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trav13d-3J3QMG8 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trav13d-3J3QMG8 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trav13d-3J3QMG8 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trav13d-3J3QMG8 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC18.04■□□□□ 0.48
Trav13d-3J3QMG8 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC18.04■□□□□ 0.48
Trav13d-3J3QMG8 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Trav13d-3J3QMG8 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trav13d-3J3QMG8 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
Trav13d-3J3QMG8 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trav13d-3J3QMG8 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trav13d-3J3QMG8 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trav13d-3J3QMG8 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trav13d-3J3QMG8 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trav13d-3J3QMG8 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Trav13d-3J3QMG8 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Trav13d-3J3QMG8 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trav13d-3J3QMG8 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Trav13d-3J3QMG8 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trav13d-3J3QMG8 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trav13d-3J3QMG8 AC093043.1-201ENSMUST00000226700 898 ntBASIC18.02■□□□□ 0.48
Trav13d-3J3QMG8 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Trav13d-3J3QMG8 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Trav13d-3J3QMG8 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC18.02■□□□□ 0.47
Trav13d-3J3QMG8 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trav13d-3J3QMG8 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Trav13d-3J3QMG8 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC18.01■□□□□ 0.47
Trav13d-3J3QMG8 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Trav13d-3J3QMG8 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trav13d-3J3QMG8 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Trav13d-3J3QMG8 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Trav13d-3J3QMG8 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trav13d-3J3QMG8 Gm9959-201ENSMUST00000068277 390 ntBASIC18.01■□□□□ 0.47
Trav13d-3J3QMG8 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trav13d-3J3QMG8 Snhg20-203ENSMUST00000182811 2153 ntBASIC18.01■□□□□ 0.47
Trav13d-3J3QMG8 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trav13d-3J3QMG8 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trav13d-3J3QMG8 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC18■□□□□ 0.47
Trav13d-3J3QMG8 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Trav13d-3J3QMG8 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC18■□□□□ 0.47
Trav13d-3J3QMG8 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trav13d-3J3QMG8 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC18■□□□□ 0.47
Trav13d-3J3QMG8 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Trav13d-3J3QMG8 Etf1-202ENSMUST00000180351 108 ntBASIC18■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms