Protein–RNA interactions for Protein: G3X9Z4

Pcf11, Cleavage and polyadenylation factor subunit homolog (S. cerevisiae), mousemouse

Predictions only

Length 1,553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcf11G3X9Z4 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC31.84■■■□□ 2.69
Pcf11G3X9Z4 Gm8493-201ENSMUST00000196881 489 ntBASIC31.84■■■□□ 2.69
Pcf11G3X9Z4 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC31.83■■■□□ 2.69
Pcf11G3X9Z4 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
Pcf11G3X9Z4 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC31.83■■■□□ 2.69
Pcf11G3X9Z4 Wdr70-203ENSMUST00000227371 1130 ntBASIC31.83■■■□□ 2.69
Pcf11G3X9Z4 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC31.83■■■□□ 2.69
Pcf11G3X9Z4 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
Pcf11G3X9Z4 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC31.83■■■□□ 2.69
Pcf11G3X9Z4 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
Pcf11G3X9Z4 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC31.82■■■□□ 2.68
Pcf11G3X9Z4 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC31.81■■■□□ 2.68
Pcf11G3X9Z4 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
Pcf11G3X9Z4 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC31.81■■■□□ 2.68
Pcf11G3X9Z4 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC31.81■■■□□ 2.68
Pcf11G3X9Z4 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
Pcf11G3X9Z4 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
Pcf11G3X9Z4 Gm6085-201ENSMUST00000182774 1470 ntBASIC31.8■■■□□ 2.68
Pcf11G3X9Z4 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC31.8■■■□□ 2.68
Pcf11G3X9Z4 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
Pcf11G3X9Z4 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC31.8■■■□□ 2.68
Pcf11G3X9Z4 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC31.8■■■□□ 2.68
Pcf11G3X9Z4 Flvcr1-202ENSMUST00000191946 1216 ntBASIC31.8■■■□□ 2.68
Pcf11G3X9Z4 Gm37415-201ENSMUST00000192265 2054 ntBASIC31.8■■■□□ 2.68
Pcf11G3X9Z4 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC31.79■■■□□ 2.68
Pcf11G3X9Z4 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC31.79■■■□□ 2.68
Pcf11G3X9Z4 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
Pcf11G3X9Z4 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
Pcf11G3X9Z4 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
Pcf11G3X9Z4 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC31.79■■■□□ 2.68
Pcf11G3X9Z4 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
Pcf11G3X9Z4 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
Pcf11G3X9Z4 Gm43403-201ENSMUST00000198011 1786 ntBASIC31.78■■■□□ 2.68
Pcf11G3X9Z4 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC31.77■■■□□ 2.68
Pcf11G3X9Z4 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC31.77■■■□□ 2.68
Pcf11G3X9Z4 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC31.77■■■□□ 2.68
Pcf11G3X9Z4 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC31.77■■■□□ 2.68
Pcf11G3X9Z4 Slc35b2-207ENSMUST00000226086 850 ntBASIC31.77■■■□□ 2.68
Pcf11G3X9Z4 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC31.77■■■□□ 2.68
Pcf11G3X9Z4 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
Pcf11G3X9Z4 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
Pcf11G3X9Z4 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC31.77■■■□□ 2.68
Pcf11G3X9Z4 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC31.77■■■□□ 2.68
Pcf11G3X9Z4 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC31.77■■■□□ 2.68
Pcf11G3X9Z4 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC31.77■■■□□ 2.68
Pcf11G3X9Z4 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.68
Pcf11G3X9Z4 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.67
Pcf11G3X9Z4 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC31.76■■■□□ 2.67
Pcf11G3X9Z4 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
Pcf11G3X9Z4 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
Pcf11G3X9Z4 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC31.75■■■□□ 2.67
Pcf11G3X9Z4 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC31.74■■■□□ 2.67
Pcf11G3X9Z4 Gm8495-201ENSMUST00000188740 694 ntBASIC31.74■■■□□ 2.67
Pcf11G3X9Z4 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC31.74■■■□□ 2.67
Pcf11G3X9Z4 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
Pcf11G3X9Z4 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
Pcf11G3X9Z4 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC31.74■■■□□ 2.67
Pcf11G3X9Z4 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC31.73■■■□□ 2.67
Pcf11G3X9Z4 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
Pcf11G3X9Z4 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC31.73■■■□□ 2.67
Pcf11G3X9Z4 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC31.73■■■□□ 2.67
Pcf11G3X9Z4 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
Pcf11G3X9Z4 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC31.73■■■□□ 2.67
Pcf11G3X9Z4 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
Pcf11G3X9Z4 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
Pcf11G3X9Z4 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC31.72■■■□□ 2.67
Pcf11G3X9Z4 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC31.72■■■□□ 2.67
Pcf11G3X9Z4 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
Pcf11G3X9Z4 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC31.71■■■□□ 2.67
Pcf11G3X9Z4 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC31.71■■■□□ 2.67
Pcf11G3X9Z4 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC31.71■■■□□ 2.67
Pcf11G3X9Z4 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC31.71■■■□□ 2.67
Pcf11G3X9Z4 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
Pcf11G3X9Z4 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.67
Pcf11G3X9Z4 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC31.7■■■□□ 2.67
Pcf11G3X9Z4 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.67
Pcf11G3X9Z4 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC31.7■■■□□ 2.66
Pcf11G3X9Z4 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC31.7■■■□□ 2.66
Pcf11G3X9Z4 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC31.69■■■□□ 2.66
Pcf11G3X9Z4 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC31.69■■■□□ 2.66
Pcf11G3X9Z4 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
Pcf11G3X9Z4 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
Pcf11G3X9Z4 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
Pcf11G3X9Z4 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC31.68■■■□□ 2.66
Pcf11G3X9Z4 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC31.68■■■□□ 2.66
Pcf11G3X9Z4 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC31.68■■■□□ 2.66
Pcf11G3X9Z4 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC31.68■■■□□ 2.66
Pcf11G3X9Z4 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC31.68■■■□□ 2.66
Pcf11G3X9Z4 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
Pcf11G3X9Z4 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
Pcf11G3X9Z4 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
Pcf11G3X9Z4 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC31.67■■■□□ 2.66
Pcf11G3X9Z4 Gm7160-202ENSMUST00000188519 1027 ntBASIC31.67■■■□□ 2.66
Pcf11G3X9Z4 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
Pcf11G3X9Z4 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC31.66■■■□□ 2.66
Pcf11G3X9Z4 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC31.66■■■□□ 2.66
Pcf11G3X9Z4 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC31.66■■■□□ 2.66
Pcf11G3X9Z4 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC31.66■■■□□ 2.66
Pcf11G3X9Z4 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC31.66■■■□□ 2.66
Pcf11G3X9Z4 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC31.66■■■□□ 2.66
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms