Protein–RNA interactions for Protein: B4XVP9

Phf11c, PHD finger protein 11C, mousemouse

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Phf11cB4XVP9 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Phf11cB4XVP9 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Phf11cB4XVP9 Gm5913-201ENSMUST00000119397 1399 ntBASIC19.44■□□□□ 0.7
Phf11cB4XVP9 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Phf11cB4XVP9 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Phf11cB4XVP9 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Phf11cB4XVP9 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Phf11cB4XVP9 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Phf11cB4XVP9 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Phf11cB4XVP9 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Phf11cB4XVP9 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Phf11cB4XVP9 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Phf11cB4XVP9 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Phf11cB4XVP9 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Phf11cB4XVP9 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
Phf11cB4XVP9 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Phf11cB4XVP9 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
Phf11cB4XVP9 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Phf11cB4XVP9 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
Phf11cB4XVP9 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Phf11cB4XVP9 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Phf11cB4XVP9 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Phf11cB4XVP9 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Phf11cB4XVP9 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
Phf11cB4XVP9 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Phf11cB4XVP9 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
Phf11cB4XVP9 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC19.42■□□□□ 0.7
Phf11cB4XVP9 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Phf11cB4XVP9 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Phf11cB4XVP9 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Phf11cB4XVP9 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Phf11cB4XVP9 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Phf11cB4XVP9 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Phf11cB4XVP9 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Phf11cB4XVP9 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Phf11cB4XVP9 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Phf11cB4XVP9 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Phf11cB4XVP9 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Phf11cB4XVP9 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC19.41■□□□□ 0.7
Phf11cB4XVP9 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Phf11cB4XVP9 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Phf11cB4XVP9 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Phf11cB4XVP9 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Phf11cB4XVP9 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Phf11cB4XVP9 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Phf11cB4XVP9 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Phf11cB4XVP9 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Phf11cB4XVP9 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Phf11cB4XVP9 Gm8093-201ENSMUST00000128935 1892 ntBASIC19.39■□□□□ 0.7
Phf11cB4XVP9 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Phf11cB4XVP9 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.7
Phf11cB4XVP9 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Phf11cB4XVP9 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC19.39■□□□□ 0.69
Phf11cB4XVP9 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Phf11cB4XVP9 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Phf11cB4XVP9 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC19.39■□□□□ 0.69
Phf11cB4XVP9 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Phf11cB4XVP9 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC19.39■□□□□ 0.69
Phf11cB4XVP9 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Phf11cB4XVP9 Gm28536-201ENSMUST00000190971 1317 ntBASIC19.39■□□□□ 0.69
Phf11cB4XVP9 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Phf11cB4XVP9 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Phf11cB4XVP9 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Phf11cB4XVP9 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Phf11cB4XVP9 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Phf11cB4XVP9 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Phf11cB4XVP9 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Phf11cB4XVP9 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC19.39■□□□□ 0.69
Phf11cB4XVP9 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Phf11cB4XVP9 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Phf11cB4XVP9 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Phf11cB4XVP9 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Phf11cB4XVP9 Gm34220-201ENSMUST00000223001 2709 ntBASIC19.38■□□□□ 0.69
Phf11cB4XVP9 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Phf11cB4XVP9 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Phf11cB4XVP9 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC19.38■□□□□ 0.69
Phf11cB4XVP9 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Phf11cB4XVP9 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC19.38■□□□□ 0.69
Phf11cB4XVP9 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC19.38■□□□□ 0.69
Phf11cB4XVP9 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Phf11cB4XVP9 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Phf11cB4XVP9 Mir6538-201ENSMUST00000183713 110 ntBASIC19.38■□□□□ 0.69
Phf11cB4XVP9 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Phf11cB4XVP9 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Phf11cB4XVP9 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Phf11cB4XVP9 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Phf11cB4XVP9 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Phf11cB4XVP9 AC116713.1-201ENSMUST00000215074 430 ntBASIC19.37■□□□□ 0.69
Phf11cB4XVP9 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Phf11cB4XVP9 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Phf11cB4XVP9 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Phf11cB4XVP9 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Phf11cB4XVP9 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Phf11cB4XVP9 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Phf11cB4XVP9 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Phf11cB4XVP9 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Phf11cB4XVP9 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Phf11cB4XVP9 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Phf11cB4XVP9 Gm11847-201ENSMUST00000125165 1119 ntBASIC19.36■□□□□ 0.69
Phf11cB4XVP9 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC19.36■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 11.6 ms