Protein–RNA interactions for Protein: A1A546

Isx, Intestine-specific homeobox, mousemouse

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IsxA1A546 Gm5131-201ENSMUST00000212776 1238 ntBASIC19.05■□□□□ 0.64
IsxA1A546 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
IsxA1A546 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
IsxA1A546 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
IsxA1A546 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
IsxA1A546 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
IsxA1A546 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
IsxA1A546 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
IsxA1A546 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
IsxA1A546 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
IsxA1A546 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
IsxA1A546 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC19.04■□□□□ 0.64
IsxA1A546 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
IsxA1A546 Gm5913-201ENSMUST00000119397 1399 ntBASIC19.04■□□□□ 0.64
IsxA1A546 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
IsxA1A546 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC19.03■□□□□ 0.64
IsxA1A546 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
IsxA1A546 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
IsxA1A546 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
IsxA1A546 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
IsxA1A546 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
IsxA1A546 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
IsxA1A546 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
IsxA1A546 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
IsxA1A546 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
IsxA1A546 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
IsxA1A546 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC19.03■□□□□ 0.64
IsxA1A546 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
IsxA1A546 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
IsxA1A546 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
IsxA1A546 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
IsxA1A546 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC19.02■□□□□ 0.64
IsxA1A546 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
IsxA1A546 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
IsxA1A546 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
IsxA1A546 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC19.02■□□□□ 0.64
IsxA1A546 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
IsxA1A546 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
IsxA1A546 Terc-201ENSMUST00000082862 423 ntBASIC19.02■□□□□ 0.64
IsxA1A546 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
IsxA1A546 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
IsxA1A546 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
IsxA1A546 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC19.02■□□□□ 0.63
IsxA1A546 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
IsxA1A546 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
IsxA1A546 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
IsxA1A546 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
IsxA1A546 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC19.01■□□□□ 0.63
IsxA1A546 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC19.01■□□□□ 0.63
IsxA1A546 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC19.01■□□□□ 0.63
IsxA1A546 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
IsxA1A546 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
IsxA1A546 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
IsxA1A546 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
IsxA1A546 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
IsxA1A546 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
IsxA1A546 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC19■□□□□ 0.63
IsxA1A546 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
IsxA1A546 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
IsxA1A546 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
IsxA1A546 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
IsxA1A546 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
IsxA1A546 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
IsxA1A546 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
IsxA1A546 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
IsxA1A546 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
IsxA1A546 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
IsxA1A546 Gm4799-201ENSMUST00000095396 657 ntBASIC18.98■□□□□ 0.63
IsxA1A546 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
IsxA1A546 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
IsxA1A546 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
IsxA1A546 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC18.97■□□□□ 0.63
IsxA1A546 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
IsxA1A546 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
IsxA1A546 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
IsxA1A546 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC18.97■□□□□ 0.63
IsxA1A546 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
IsxA1A546 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
IsxA1A546 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
IsxA1A546 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
IsxA1A546 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
IsxA1A546 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
IsxA1A546 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
IsxA1A546 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC18.96■□□□□ 0.63
IsxA1A546 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
IsxA1A546 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
IsxA1A546 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
IsxA1A546 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC18.96■□□□□ 0.63
IsxA1A546 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
IsxA1A546 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
IsxA1A546 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
IsxA1A546 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
IsxA1A546 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
IsxA1A546 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
IsxA1A546 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
IsxA1A546 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
IsxA1A546 Gm11175-201ENSMUST00000116172 543 ntBASIC18.95■□□□□ 0.62
IsxA1A546 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
IsxA1A546 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
IsxA1A546 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 51.8 ms