Protein–RNA interactions for Protein: A0A0G2JG37

Trav9d-4, T cell receptor alpha variable 9D-4 (Fragment), mousemouse

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9d-4A0A0G2JG37 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav9d-4A0A0G2JG37 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav9d-4A0A0G2JG37 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav9d-4A0A0G2JG37 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav9d-4A0A0G2JG37 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trav9d-4A0A0G2JG37 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav9d-4A0A0G2JG37 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trav9d-4A0A0G2JG37 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav9d-4A0A0G2JG37 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav9d-4A0A0G2JG37 AC167019.3-201ENSMUST00000228225 1266 ntBASIC14.01□□□□□ -0.17
Trav9d-4A0A0G2JG37 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav9d-4A0A0G2JG37 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC14.01□□□□□ -0.17
Trav9d-4A0A0G2JG37 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav9d-4A0A0G2JG37 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Trav9d-4A0A0G2JG37 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trav9d-4A0A0G2JG37 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav9d-4A0A0G2JG37 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav9d-4A0A0G2JG37 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trav9d-4A0A0G2JG37 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Trav9d-4A0A0G2JG37 Gm4430-201ENSMUST00000192413 1943 ntBASIC14□□□□□ -0.17
Trav9d-4A0A0G2JG37 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Trav9d-4A0A0G2JG37 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav9d-4A0A0G2JG37 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trav9d-4A0A0G2JG37 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC14□□□□□ -0.17
Trav9d-4A0A0G2JG37 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trav9d-4A0A0G2JG37 Pkd1-207ENSMUST00000228550 1050 ntBASIC14□□□□□ -0.17
Trav9d-4A0A0G2JG37 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Trav9d-4A0A0G2JG37 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav9d-4A0A0G2JG37 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Trav9d-4A0A0G2JG37 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav9d-4A0A0G2JG37 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Trav9d-4A0A0G2JG37 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav9d-4A0A0G2JG37 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trav9d-4A0A0G2JG37 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav9d-4A0A0G2JG37 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trav9d-4A0A0G2JG37 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Trav9d-4A0A0G2JG37 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trav9d-4A0A0G2JG37 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav9d-4A0A0G2JG37 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav9d-4A0A0G2JG37 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC13.99□□□□□ -0.17
Trav9d-4A0A0G2JG37 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trav9d-4A0A0G2JG37 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Trav9d-4A0A0G2JG37 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav9d-4A0A0G2JG37 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav9d-4A0A0G2JG37 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav9d-4A0A0G2JG37 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav9d-4A0A0G2JG37 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav9d-4A0A0G2JG37 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC13.99□□□□□ -0.17
Trav9d-4A0A0G2JG37 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Trav9d-4A0A0G2JG37 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav9d-4A0A0G2JG37 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav9d-4A0A0G2JG37 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav9d-4A0A0G2JG37 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
Trav9d-4A0A0G2JG37 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav9d-4A0A0G2JG37 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav9d-4A0A0G2JG37 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
Trav9d-4A0A0G2JG37 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav9d-4A0A0G2JG37 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav9d-4A0A0G2JG37 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav9d-4A0A0G2JG37 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav9d-4A0A0G2JG37 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav9d-4A0A0G2JG37 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
Trav9d-4A0A0G2JG37 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav9d-4A0A0G2JG37 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav9d-4A0A0G2JG37 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Trav9d-4A0A0G2JG37 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav9d-4A0A0G2JG37 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Trav9d-4A0A0G2JG37 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav9d-4A0A0G2JG37 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Trav9d-4A0A0G2JG37 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav9d-4A0A0G2JG37 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav9d-4A0A0G2JG37 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav9d-4A0A0G2JG37 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
Trav9d-4A0A0G2JG37 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav9d-4A0A0G2JG37 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav9d-4A0A0G2JG37 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav9d-4A0A0G2JG37 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav9d-4A0A0G2JG37 Gm44949-201ENSMUST00000206423 1450 ntBASIC13.97□□□□□ -0.17
Trav9d-4A0A0G2JG37 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav9d-4A0A0G2JG37 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Trav9d-4A0A0G2JG37 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Trav9d-4A0A0G2JG37 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav9d-4A0A0G2JG37 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav9d-4A0A0G2JG37 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav9d-4A0A0G2JG37 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Trav9d-4A0A0G2JG37 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Trav9d-4A0A0G2JG37 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav9d-4A0A0G2JG37 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav9d-4A0A0G2JG37 AC164883.3-201ENSMUST00000227396 1774 ntBASIC13.96□□□□□ -0.17
Trav9d-4A0A0G2JG37 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav9d-4A0A0G2JG37 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav9d-4A0A0G2JG37 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav9d-4A0A0G2JG37 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav9d-4A0A0G2JG37 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav9d-4A0A0G2JG37 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav9d-4A0A0G2JG37 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav9d-4A0A0G2JG37 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC13.96□□□□□ -0.18
Trav9d-4A0A0G2JG37 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trav9d-4A0A0G2JG37 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trav9d-4A0A0G2JG37 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 16.1 ms