Protein–RNA interactions for Protein: A0A0G2JFX3

Trav13d-4, T cell receptor alpha variable 13D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-4A0A0G2JFX3 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trav13d-4A0A0G2JFX3 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav13d-4A0A0G2JFX3 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav13d-4A0A0G2JFX3 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav13d-4A0A0G2JFX3 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav13d-4A0A0G2JFX3 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC14.06□□□□□ -0.16
Trav13d-4A0A0G2JFX3 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav13d-4A0A0G2JFX3 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav13d-4A0A0G2JFX3 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav13d-4A0A0G2JFX3 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Trav13d-4A0A0G2JFX3 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav13d-4A0A0G2JFX3 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav13d-4A0A0G2JFX3 Snhg20-203ENSMUST00000182811 2153 ntBASIC14.06□□□□□ -0.16
Trav13d-4A0A0G2JFX3 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav13d-4A0A0G2JFX3 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav13d-4A0A0G2JFX3 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Trav13d-4A0A0G2JFX3 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav13d-4A0A0G2JFX3 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav13d-4A0A0G2JFX3 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav13d-4A0A0G2JFX3 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Trav13d-4A0A0G2JFX3 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC14.05□□□□□ -0.16
Trav13d-4A0A0G2JFX3 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trav13d-4A0A0G2JFX3 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav13d-4A0A0G2JFX3 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Trav13d-4A0A0G2JFX3 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav13d-4A0A0G2JFX3 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav13d-4A0A0G2JFX3 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trav13d-4A0A0G2JFX3 Gm14523-201ENSMUST00000117260 558 ntBASIC14.05□□□□□ -0.16
Trav13d-4A0A0G2JFX3 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC14.05□□□□□ -0.16
Trav13d-4A0A0G2JFX3 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC14.05□□□□□ -0.16
Trav13d-4A0A0G2JFX3 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav13d-4A0A0G2JFX3 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav13d-4A0A0G2JFX3 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav13d-4A0A0G2JFX3 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trav13d-4A0A0G2JFX3 Gm7332-201ENSMUST00000118351 454 ntBASIC14.04□□□□□ -0.16
Trav13d-4A0A0G2JFX3 Gm5987-201ENSMUST00000196433 1151 ntBASIC14.04□□□□□ -0.16
Trav13d-4A0A0G2JFX3 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trav13d-4A0A0G2JFX3 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav13d-4A0A0G2JFX3 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav13d-4A0A0G2JFX3 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Trav13d-4A0A0G2JFX3 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav13d-4A0A0G2JFX3 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav13d-4A0A0G2JFX3 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav13d-4A0A0G2JFX3 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav13d-4A0A0G2JFX3 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Trav13d-4A0A0G2JFX3 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Trav13d-4A0A0G2JFX3 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav13d-4A0A0G2JFX3 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav13d-4A0A0G2JFX3 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav13d-4A0A0G2JFX3 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav13d-4A0A0G2JFX3 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav13d-4A0A0G2JFX3 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trav13d-4A0A0G2JFX3 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav13d-4A0A0G2JFX3 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav13d-4A0A0G2JFX3 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav13d-4A0A0G2JFX3 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trav13d-4A0A0G2JFX3 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav13d-4A0A0G2JFX3 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav13d-4A0A0G2JFX3 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC14.02□□□□□ -0.16
Trav13d-4A0A0G2JFX3 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav13d-4A0A0G2JFX3 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav13d-4A0A0G2JFX3 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav13d-4A0A0G2JFX3 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Trav13d-4A0A0G2JFX3 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav13d-4A0A0G2JFX3 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav13d-4A0A0G2JFX3 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Trav13d-4A0A0G2JFX3 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav13d-4A0A0G2JFX3 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav13d-4A0A0G2JFX3 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC14.02□□□□□ -0.16
Trav13d-4A0A0G2JFX3 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
Trav13d-4A0A0G2JFX3 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Trav13d-4A0A0G2JFX3 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC14.02□□□□□ -0.16
Trav13d-4A0A0G2JFX3 Gm5913-201ENSMUST00000119397 1399 ntBASIC14.02□□□□□ -0.17
Trav13d-4A0A0G2JFX3 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC14.02□□□□□ -0.17
Trav13d-4A0A0G2JFX3 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav13d-4A0A0G2JFX3 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav13d-4A0A0G2JFX3 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC14.02□□□□□ -0.17
Trav13d-4A0A0G2JFX3 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC14.01□□□□□ -0.17
Trav13d-4A0A0G2JFX3 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav13d-4A0A0G2JFX3 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav13d-4A0A0G2JFX3 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav13d-4A0A0G2JFX3 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav13d-4A0A0G2JFX3 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav13d-4A0A0G2JFX3 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav13d-4A0A0G2JFX3 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav13d-4A0A0G2JFX3 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav13d-4A0A0G2JFX3 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC14□□□□□ -0.17
Trav13d-4A0A0G2JFX3 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav13d-4A0A0G2JFX3 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC14□□□□□ -0.17
Trav13d-4A0A0G2JFX3 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Trav13d-4A0A0G2JFX3 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trav13d-4A0A0G2JFX3 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Trav13d-4A0A0G2JFX3 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Trav13d-4A0A0G2JFX3 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav13d-4A0A0G2JFX3 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC14□□□□□ -0.17
Trav13d-4A0A0G2JFX3 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav13d-4A0A0G2JFX3 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav13d-4A0A0G2JFX3 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav13d-4A0A0G2JFX3 Gm11175-201ENSMUST00000116172 543 ntBASIC14□□□□□ -0.17
Trav13d-4A0A0G2JFX3 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC14□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms