Protein–RNA interactions for Protein: A0A0G2JEM0

Trav3n-3, T cell receptor alpha variable 3D-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3n-3A0A0G2JEM0 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav3n-3A0A0G2JEM0 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
Trav3n-3A0A0G2JEM0 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Trav3n-3A0A0G2JEM0 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav3n-3A0A0G2JEM0 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav3n-3A0A0G2JEM0 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav3n-3A0A0G2JEM0 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav3n-3A0A0G2JEM0 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav3n-3A0A0G2JEM0 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Trav3n-3A0A0G2JEM0 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC15.41■□□□□ 0.06
Trav3n-3A0A0G2JEM0 AC117769.4-201ENSMUST00000225679 685 ntBASIC15.41■□□□□ 0.06
Trav3n-3A0A0G2JEM0 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Trav3n-3A0A0G2JEM0 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav3n-3A0A0G2JEM0 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav3n-3A0A0G2JEM0 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Trav3n-3A0A0G2JEM0 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav3n-3A0A0G2JEM0 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav3n-3A0A0G2JEM0 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC15.4■□□□□ 0.06
Trav3n-3A0A0G2JEM0 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
Trav3n-3A0A0G2JEM0 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC15.4■□□□□ 0.06
Trav3n-3A0A0G2JEM0 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav3n-3A0A0G2JEM0 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav3n-3A0A0G2JEM0 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Trav3n-3A0A0G2JEM0 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav3n-3A0A0G2JEM0 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav3n-3A0A0G2JEM0 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav3n-3A0A0G2JEM0 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC15.4■□□□□ 0.06
Trav3n-3A0A0G2JEM0 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav3n-3A0A0G2JEM0 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav3n-3A0A0G2JEM0 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav3n-3A0A0G2JEM0 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav3n-3A0A0G2JEM0 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav3n-3A0A0G2JEM0 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav3n-3A0A0G2JEM0 AC117245.4-201ENSMUST00000217388 1646 ntBASIC15.39■□□□□ 0.05
Trav3n-3A0A0G2JEM0 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav3n-3A0A0G2JEM0 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav3n-3A0A0G2JEM0 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav3n-3A0A0G2JEM0 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav3n-3A0A0G2JEM0 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC15.39■□□□□ 0.05
Trav3n-3A0A0G2JEM0 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC15.39■□□□□ 0.05
Trav3n-3A0A0G2JEM0 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav3n-3A0A0G2JEM0 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Trav3n-3A0A0G2JEM0 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav3n-3A0A0G2JEM0 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav3n-3A0A0G2JEM0 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav3n-3A0A0G2JEM0 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav3n-3A0A0G2JEM0 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Trav3n-3A0A0G2JEM0 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav3n-3A0A0G2JEM0 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav3n-3A0A0G2JEM0 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Trav3n-3A0A0G2JEM0 Gm38342-201ENSMUST00000195710 2980 ntBASIC15.39■□□□□ 0.05
Trav3n-3A0A0G2JEM0 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav3n-3A0A0G2JEM0 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC15.38■□□□□ 0.05
Trav3n-3A0A0G2JEM0 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav3n-3A0A0G2JEM0 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav3n-3A0A0G2JEM0 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav3n-3A0A0G2JEM0 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
Trav3n-3A0A0G2JEM0 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav3n-3A0A0G2JEM0 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
Trav3n-3A0A0G2JEM0 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC15.37■□□□□ 0.05
Trav3n-3A0A0G2JEM0 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC15.37■□□□□ 0.05
Trav3n-3A0A0G2JEM0 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC15.37■□□□□ 0.05
Trav3n-3A0A0G2JEM0 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC15.37■□□□□ 0.05
Trav3n-3A0A0G2JEM0 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC15.37■□□□□ 0.05
Trav3n-3A0A0G2JEM0 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav3n-3A0A0G2JEM0 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC15.37■□□□□ 0.05
Trav3n-3A0A0G2JEM0 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Trav3n-3A0A0G2JEM0 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC15.37■□□□□ 0.05
Trav3n-3A0A0G2JEM0 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav3n-3A0A0G2JEM0 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Trav3n-3A0A0G2JEM0 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
Trav3n-3A0A0G2JEM0 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC15.36■□□□□ 0.05
Trav3n-3A0A0G2JEM0 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC15.36■□□□□ 0.05
Trav3n-3A0A0G2JEM0 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Trav3n-3A0A0G2JEM0 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC15.36■□□□□ 0.05
Trav3n-3A0A0G2JEM0 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav3n-3A0A0G2JEM0 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Trav3n-3A0A0G2JEM0 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav3n-3A0A0G2JEM0 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav3n-3A0A0G2JEM0 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav3n-3A0A0G2JEM0 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC15.35■□□□□ 0.05
Trav3n-3A0A0G2JEM0 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Trav3n-3A0A0G2JEM0 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav3n-3A0A0G2JEM0 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav3n-3A0A0G2JEM0 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC15.35■□□□□ 0.05
Trav3n-3A0A0G2JEM0 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC15.35■□□□□ 0.05
Trav3n-3A0A0G2JEM0 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Trav3n-3A0A0G2JEM0 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav3n-3A0A0G2JEM0 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Trav3n-3A0A0G2JEM0 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav3n-3A0A0G2JEM0 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
Trav3n-3A0A0G2JEM0 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav3n-3A0A0G2JEM0 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Trav3n-3A0A0G2JEM0 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav3n-3A0A0G2JEM0 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav3n-3A0A0G2JEM0 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav3n-3A0A0G2JEM0 AC115037.1-201ENSMUST00000223391 2173 ntBASIC15.34■□□□□ 0.05
Trav3n-3A0A0G2JEM0 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav3n-3A0A0G2JEM0 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav3n-3A0A0G2JEM0 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 14.7 ms