Protein–RNA interactions for Protein: A0A0B4J1K4

Trav19, T cell receptor alpha variable 19 (Fragment), mousemouse

Predictions only

Length 119 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav19A0A0B4J1K4 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav19A0A0B4J1K4 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Trav19A0A0B4J1K4 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav19A0A0B4J1K4 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav19A0A0B4J1K4 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav19A0A0B4J1K4 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav19A0A0B4J1K4 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav19A0A0B4J1K4 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav19A0A0B4J1K4 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav19A0A0B4J1K4 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav19A0A0B4J1K4 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav19A0A0B4J1K4 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav19A0A0B4J1K4 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav19A0A0B4J1K4 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav19A0A0B4J1K4 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC15.31■□□□□ 0.04
Trav19A0A0B4J1K4 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav19A0A0B4J1K4 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav19A0A0B4J1K4 Gm15043-201ENSMUST00000118843 1543 ntBASIC15.31■□□□□ 0.04
Trav19A0A0B4J1K4 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trav19A0A0B4J1K4 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav19A0A0B4J1K4 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav19A0A0B4J1K4 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Trav19A0A0B4J1K4 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav19A0A0B4J1K4 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav19A0A0B4J1K4 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav19A0A0B4J1K4 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trav19A0A0B4J1K4 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav19A0A0B4J1K4 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav19A0A0B4J1K4 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC15.3■□□□□ 0.04
Trav19A0A0B4J1K4 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav19A0A0B4J1K4 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav19A0A0B4J1K4 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav19A0A0B4J1K4 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav19A0A0B4J1K4 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav19A0A0B4J1K4 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav19A0A0B4J1K4 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC15.29■□□□□ 0.04
Trav19A0A0B4J1K4 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Trav19A0A0B4J1K4 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav19A0A0B4J1K4 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav19A0A0B4J1K4 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav19A0A0B4J1K4 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC15.29■□□□□ 0.04
Trav19A0A0B4J1K4 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC15.29■□□□□ 0.04
Trav19A0A0B4J1K4 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC15.29■□□□□ 0.04
Trav19A0A0B4J1K4 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
Trav19A0A0B4J1K4 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trav19A0A0B4J1K4 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trav19A0A0B4J1K4 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav19A0A0B4J1K4 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav19A0A0B4J1K4 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav19A0A0B4J1K4 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav19A0A0B4J1K4 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trav19A0A0B4J1K4 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav19A0A0B4J1K4 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC15.28■□□□□ 0.04
Trav19A0A0B4J1K4 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav19A0A0B4J1K4 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Trav19A0A0B4J1K4 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC15.28■□□□□ 0.04
Trav19A0A0B4J1K4 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav19A0A0B4J1K4 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav19A0A0B4J1K4 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trav19A0A0B4J1K4 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trav19A0A0B4J1K4 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav19A0A0B4J1K4 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav19A0A0B4J1K4 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
Trav19A0A0B4J1K4 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Trav19A0A0B4J1K4 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav19A0A0B4J1K4 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav19A0A0B4J1K4 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Trav19A0A0B4J1K4 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Trav19A0A0B4J1K4 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav19A0A0B4J1K4 Gm4430-201ENSMUST00000192413 1943 ntBASIC15.27■□□□□ 0.04
Trav19A0A0B4J1K4 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav19A0A0B4J1K4 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav19A0A0B4J1K4 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav19A0A0B4J1K4 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Trav19A0A0B4J1K4 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC15.27■□□□□ 0.04
Trav19A0A0B4J1K4 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav19A0A0B4J1K4 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav19A0A0B4J1K4 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trav19A0A0B4J1K4 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trav19A0A0B4J1K4 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trav19A0A0B4J1K4 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Trav19A0A0B4J1K4 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav19A0A0B4J1K4 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav19A0A0B4J1K4 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Trav19A0A0B4J1K4 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav19A0A0B4J1K4 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav19A0A0B4J1K4 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trav19A0A0B4J1K4 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav19A0A0B4J1K4 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav19A0A0B4J1K4 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC15.25■□□□□ 0.03
Trav19A0A0B4J1K4 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trav19A0A0B4J1K4 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Trav19A0A0B4J1K4 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC15.25■□□□□ 0.03
Trav19A0A0B4J1K4 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav19A0A0B4J1K4 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav19A0A0B4J1K4 AC152827.1-201ENSMUST00000221143 2189 ntBASIC15.25■□□□□ 0.03
Trav19A0A0B4J1K4 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Trav19A0A0B4J1K4 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Trav19A0A0B4J1K4 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Trav19A0A0B4J1K4 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms