Protein–RNA interactions for Protein: A0A0B4J1J2

Igkv5-43, Immunoglobulin kappa chain variable 5-43 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv5-43A0A0B4J1J2 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Igkv5-43A0A0B4J1J2 Gm43530-201ENSMUST00000195920 274 ntBASIC21.2■□□□□ 0.98
Igkv5-43A0A0B4J1J2 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Igkv5-43A0A0B4J1J2 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
Igkv5-43A0A0B4J1J2 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Igkv5-43A0A0B4J1J2 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Igkv5-43A0A0B4J1J2 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Igkv5-43A0A0B4J1J2 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Igkv5-43A0A0B4J1J2 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Igkv5-43A0A0B4J1J2 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC21.19■□□□□ 0.98
Igkv5-43A0A0B4J1J2 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Igkv5-43A0A0B4J1J2 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC21.19■□□□□ 0.98
Igkv5-43A0A0B4J1J2 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Igkv5-43A0A0B4J1J2 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC21.19■□□□□ 0.98
Igkv5-43A0A0B4J1J2 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
Igkv5-43A0A0B4J1J2 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Igkv5-43A0A0B4J1J2 Gm27454-201ENSMUST00000185090 204 ntBASIC21.18■□□□□ 0.98
Igkv5-43A0A0B4J1J2 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC21.18■□□□□ 0.98
Igkv5-43A0A0B4J1J2 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Igkv5-43A0A0B4J1J2 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC21.18■□□□□ 0.98
Igkv5-43A0A0B4J1J2 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Igkv5-43A0A0B4J1J2 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Igkv5-43A0A0B4J1J2 Gm8770-201ENSMUST00000121113 1109 ntBASIC21.17■□□□□ 0.98
Igkv5-43A0A0B4J1J2 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC21.17■□□□□ 0.98
Igkv5-43A0A0B4J1J2 Appbp2os-202ENSMUST00000206972 447 ntBASIC21.17■□□□□ 0.98
Igkv5-43A0A0B4J1J2 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Igkv5-43A0A0B4J1J2 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
Igkv5-43A0A0B4J1J2 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Igkv5-43A0A0B4J1J2 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Igkv5-43A0A0B4J1J2 Gm12821-201ENSMUST00000120022 600 ntBASIC21.16■□□□□ 0.98
Igkv5-43A0A0B4J1J2 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC21.16■□□□□ 0.98
Igkv5-43A0A0B4J1J2 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Igkv5-43A0A0B4J1J2 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Igkv5-43A0A0B4J1J2 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Igkv5-43A0A0B4J1J2 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Igkv5-43A0A0B4J1J2 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Igkv5-43A0A0B4J1J2 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Igkv5-43A0A0B4J1J2 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Igkv5-43A0A0B4J1J2 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Igkv5-43A0A0B4J1J2 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Igkv5-43A0A0B4J1J2 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Igkv5-43A0A0B4J1J2 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Igkv5-43A0A0B4J1J2 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Igkv5-43A0A0B4J1J2 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.98
Igkv5-43A0A0B4J1J2 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Igkv5-43A0A0B4J1J2 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Igkv5-43A0A0B4J1J2 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Igkv5-43A0A0B4J1J2 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Igkv5-43A0A0B4J1J2 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC21.14■□□□□ 0.97
Igkv5-43A0A0B4J1J2 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Igkv5-43A0A0B4J1J2 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Igkv5-43A0A0B4J1J2 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC21.13■□□□□ 0.97
Igkv5-43A0A0B4J1J2 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
Igkv5-43A0A0B4J1J2 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Igkv5-43A0A0B4J1J2 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
Igkv5-43A0A0B4J1J2 AC166356.1-201ENSMUST00000228236 1426 ntBASIC21.12■□□□□ 0.97
Igkv5-43A0A0B4J1J2 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Igkv5-43A0A0B4J1J2 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Igkv5-43A0A0B4J1J2 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Igkv5-43A0A0B4J1J2 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
Igkv5-43A0A0B4J1J2 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Igkv5-43A0A0B4J1J2 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Igkv5-43A0A0B4J1J2 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Igkv5-43A0A0B4J1J2 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Igkv5-43A0A0B4J1J2 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Igkv5-43A0A0B4J1J2 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Igkv5-43A0A0B4J1J2 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
Igkv5-43A0A0B4J1J2 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Igkv5-43A0A0B4J1J2 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Igkv5-43A0A0B4J1J2 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
Igkv5-43A0A0B4J1J2 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Igkv5-43A0A0B4J1J2 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC21.11■□□□□ 0.97
Igkv5-43A0A0B4J1J2 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Igkv5-43A0A0B4J1J2 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC21.11■□□□□ 0.97
Igkv5-43A0A0B4J1J2 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Igkv5-43A0A0B4J1J2 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Igkv5-43A0A0B4J1J2 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
Igkv5-43A0A0B4J1J2 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Igkv5-43A0A0B4J1J2 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Igkv5-43A0A0B4J1J2 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Igkv5-43A0A0B4J1J2 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Igkv5-43A0A0B4J1J2 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Igkv5-43A0A0B4J1J2 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
Igkv5-43A0A0B4J1J2 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Igkv5-43A0A0B4J1J2 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Igkv5-43A0A0B4J1J2 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Igkv5-43A0A0B4J1J2 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Igkv5-43A0A0B4J1J2 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Igkv5-43A0A0B4J1J2 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Igkv5-43A0A0B4J1J2 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Igkv5-43A0A0B4J1J2 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Igkv5-43A0A0B4J1J2 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC21.08■□□□□ 0.97
Igkv5-43A0A0B4J1J2 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Igkv5-43A0A0B4J1J2 Gm15039-201ENSMUST00000118914 875 ntBASIC21.08■□□□□ 0.97
Igkv5-43A0A0B4J1J2 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC21.08■□□□□ 0.97
Igkv5-43A0A0B4J1J2 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC21.08■□□□□ 0.97
Igkv5-43A0A0B4J1J2 Gm45417-201ENSMUST00000209533 758 ntBASIC21.08■□□□□ 0.97
Igkv5-43A0A0B4J1J2 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC21.08■□□□□ 0.97
Igkv5-43A0A0B4J1J2 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Igkv5-43A0A0B4J1J2 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 14.7 ms