Protein–RNA interactions for Protein: A0A0A6YXN4

Ighv1-18, Immunoglobulin heavy variable V1-18 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-18A0A0A6YXN4 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ighv1-18A0A0A6YXN4 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ighv1-18A0A0A6YXN4 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ighv1-18A0A0A6YXN4 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC16.66■□□□□ 0.26
Ighv1-18A0A0A6YXN4 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ighv1-18A0A0A6YXN4 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ighv1-18A0A0A6YXN4 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Ighv1-18A0A0A6YXN4 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Ighv1-18A0A0A6YXN4 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Ighv1-18A0A0A6YXN4 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ighv1-18A0A0A6YXN4 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ighv1-18A0A0A6YXN4 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ighv1-18A0A0A6YXN4 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Ighv1-18A0A0A6YXN4 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ighv1-18A0A0A6YXN4 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Ighv1-18A0A0A6YXN4 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC16.65■□□□□ 0.26
Ighv1-18A0A0A6YXN4 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Ighv1-18A0A0A6YXN4 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Ighv1-18A0A0A6YXN4 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC16.65■□□□□ 0.26
Ighv1-18A0A0A6YXN4 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Ighv1-18A0A0A6YXN4 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC16.65■□□□□ 0.26
Ighv1-18A0A0A6YXN4 Gm5812-201ENSMUST00000061073 957 ntBASIC16.65■□□□□ 0.26
Ighv1-18A0A0A6YXN4 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
Ighv1-18A0A0A6YXN4 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Ighv1-18A0A0A6YXN4 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ighv1-18A0A0A6YXN4 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ighv1-18A0A0A6YXN4 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ighv1-18A0A0A6YXN4 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ighv1-18A0A0A6YXN4 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ighv1-18A0A0A6YXN4 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ighv1-18A0A0A6YXN4 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC16.64■□□□□ 0.25
Ighv1-18A0A0A6YXN4 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ighv1-18A0A0A6YXN4 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ighv1-18A0A0A6YXN4 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Ighv1-18A0A0A6YXN4 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Ighv1-18A0A0A6YXN4 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Ighv1-18A0A0A6YXN4 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ighv1-18A0A0A6YXN4 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ighv1-18A0A0A6YXN4 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Ighv1-18A0A0A6YXN4 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Ighv1-18A0A0A6YXN4 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ighv1-18A0A0A6YXN4 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ighv1-18A0A0A6YXN4 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ighv1-18A0A0A6YXN4 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ighv1-18A0A0A6YXN4 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Ighv1-18A0A0A6YXN4 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Ighv1-18A0A0A6YXN4 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ighv1-18A0A0A6YXN4 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ighv1-18A0A0A6YXN4 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ighv1-18A0A0A6YXN4 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ighv1-18A0A0A6YXN4 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ighv1-18A0A0A6YXN4 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Ighv1-18A0A0A6YXN4 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ighv1-18A0A0A6YXN4 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Ighv1-18A0A0A6YXN4 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Ighv1-18A0A0A6YXN4 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ighv1-18A0A0A6YXN4 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ighv1-18A0A0A6YXN4 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Ighv1-18A0A0A6YXN4 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ighv1-18A0A0A6YXN4 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ighv1-18A0A0A6YXN4 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC16.62■□□□□ 0.25
Ighv1-18A0A0A6YXN4 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ighv1-18A0A0A6YXN4 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Ighv1-18A0A0A6YXN4 AC152827.1-201ENSMUST00000221143 2189 ntBASIC16.61■□□□□ 0.25
Ighv1-18A0A0A6YXN4 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ighv1-18A0A0A6YXN4 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ighv1-18A0A0A6YXN4 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Ighv1-18A0A0A6YXN4 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Ighv1-18A0A0A6YXN4 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ighv1-18A0A0A6YXN4 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ighv1-18A0A0A6YXN4 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Ighv1-18A0A0A6YXN4 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Ighv1-18A0A0A6YXN4 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ighv1-18A0A0A6YXN4 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ighv1-18A0A0A6YXN4 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ighv1-18A0A0A6YXN4 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ighv1-18A0A0A6YXN4 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Ighv1-18A0A0A6YXN4 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ighv1-18A0A0A6YXN4 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ighv1-18A0A0A6YXN4 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ighv1-18A0A0A6YXN4 Gm13238-201ENSMUST00000117655 780 ntBASIC16.6■□□□□ 0.25
Ighv1-18A0A0A6YXN4 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Ighv1-18A0A0A6YXN4 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ighv1-18A0A0A6YXN4 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Ighv1-18A0A0A6YXN4 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ighv1-18A0A0A6YXN4 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Ighv1-18A0A0A6YXN4 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ighv1-18A0A0A6YXN4 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC16.59■□□□□ 0.25
Ighv1-18A0A0A6YXN4 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ighv1-18A0A0A6YXN4 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ighv1-18A0A0A6YXN4 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC16.59■□□□□ 0.25
Ighv1-18A0A0A6YXN4 Gm15546-201ENSMUST00000122095 826 ntBASIC16.59■□□□□ 0.25
Ighv1-18A0A0A6YXN4 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Ighv1-18A0A0A6YXN4 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC16.59■□□□□ 0.25
Ighv1-18A0A0A6YXN4 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ighv1-18A0A0A6YXN4 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
Ighv1-18A0A0A6YXN4 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ighv1-18A0A0A6YXN4 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ighv1-18A0A0A6YXN4 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Ighv1-18A0A0A6YXN4 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 13.1 ms