Protein–RNA interactions for Protein: A0A0A6YX66

Ighv1-20, Immunoglobulin heavy variable V1-20 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-20A0A0A6YX66 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Ighv1-20A0A0A6YX66 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ighv1-20A0A0A6YX66 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ighv1-20A0A0A6YX66 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC16.63■□□□□ 0.25
Ighv1-20A0A0A6YX66 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ighv1-20A0A0A6YX66 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ighv1-20A0A0A6YX66 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ighv1-20A0A0A6YX66 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC16.63■□□□□ 0.25
Ighv1-20A0A0A6YX66 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC16.63■□□□□ 0.25
Ighv1-20A0A0A6YX66 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Ighv1-20A0A0A6YX66 Gm7143-201ENSMUST00000222811 859 ntBASIC16.63■□□□□ 0.25
Ighv1-20A0A0A6YX66 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ighv1-20A0A0A6YX66 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Ighv1-20A0A0A6YX66 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Ighv1-20A0A0A6YX66 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC16.62■□□□□ 0.25
Ighv1-20A0A0A6YX66 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ighv1-20A0A0A6YX66 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC16.62■□□□□ 0.25
Ighv1-20A0A0A6YX66 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ighv1-20A0A0A6YX66 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ighv1-20A0A0A6YX66 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ighv1-20A0A0A6YX66 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ighv1-20A0A0A6YX66 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Ighv1-20A0A0A6YX66 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC16.62■□□□□ 0.25
Ighv1-20A0A0A6YX66 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ighv1-20A0A0A6YX66 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ighv1-20A0A0A6YX66 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC16.62■□□□□ 0.25
Ighv1-20A0A0A6YX66 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ighv1-20A0A0A6YX66 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ighv1-20A0A0A6YX66 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Ighv1-20A0A0A6YX66 Gm21956-201ENSMUST00000179946 522 ntBASIC16.61■□□□□ 0.25
Ighv1-20A0A0A6YX66 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC16.61■□□□□ 0.25
Ighv1-20A0A0A6YX66 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Ighv1-20A0A0A6YX66 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC16.61■□□□□ 0.25
Ighv1-20A0A0A6YX66 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Ighv1-20A0A0A6YX66 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC16.61■□□□□ 0.25
Ighv1-20A0A0A6YX66 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Ighv1-20A0A0A6YX66 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ighv1-20A0A0A6YX66 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC16.6■□□□□ 0.25
Ighv1-20A0A0A6YX66 Gm37415-201ENSMUST00000192265 2054 ntBASIC16.6■□□□□ 0.25
Ighv1-20A0A0A6YX66 Dmtn-209ENSMUST00000228295 2572 ntBASIC16.6■□□□□ 0.25
Ighv1-20A0A0A6YX66 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC16.6■□□□□ 0.25
Ighv1-20A0A0A6YX66 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ighv1-20A0A0A6YX66 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC16.6■□□□□ 0.25
Ighv1-20A0A0A6YX66 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Ighv1-20A0A0A6YX66 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ighv1-20A0A0A6YX66 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ighv1-20A0A0A6YX66 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ighv1-20A0A0A6YX66 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ighv1-20A0A0A6YX66 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Ighv1-20A0A0A6YX66 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Ighv1-20A0A0A6YX66 Gm15039-201ENSMUST00000118914 875 ntBASIC16.59■□□□□ 0.25
Ighv1-20A0A0A6YX66 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ighv1-20A0A0A6YX66 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ighv1-20A0A0A6YX66 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Ighv1-20A0A0A6YX66 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ighv1-20A0A0A6YX66 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ighv1-20A0A0A6YX66 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC16.59■□□□□ 0.25
Ighv1-20A0A0A6YX66 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ighv1-20A0A0A6YX66 Gm43403-201ENSMUST00000198011 1786 ntBASIC16.59■□□□□ 0.25
Ighv1-20A0A0A6YX66 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
Ighv1-20A0A0A6YX66 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ighv1-20A0A0A6YX66 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ighv1-20A0A0A6YX66 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Ighv1-20A0A0A6YX66 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ighv1-20A0A0A6YX66 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Ighv1-20A0A0A6YX66 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ighv1-20A0A0A6YX66 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ighv1-20A0A0A6YX66 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ighv1-20A0A0A6YX66 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ighv1-20A0A0A6YX66 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ighv1-20A0A0A6YX66 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ighv1-20A0A0A6YX66 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Ighv1-20A0A0A6YX66 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ighv1-20A0A0A6YX66 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ighv1-20A0A0A6YX66 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC16.57■□□□□ 0.24
Ighv1-20A0A0A6YX66 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ighv1-20A0A0A6YX66 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ighv1-20A0A0A6YX66 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ighv1-20A0A0A6YX66 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ighv1-20A0A0A6YX66 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC16.56■□□□□ 0.24
Ighv1-20A0A0A6YX66 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ighv1-20A0A0A6YX66 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ighv1-20A0A0A6YX66 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC16.56■□□□□ 0.24
Ighv1-20A0A0A6YX66 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ighv1-20A0A0A6YX66 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC16.56■□□□□ 0.24
Ighv1-20A0A0A6YX66 Gm12821-201ENSMUST00000120022 600 ntBASIC16.56■□□□□ 0.24
Ighv1-20A0A0A6YX66 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Ighv1-20A0A0A6YX66 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
Ighv1-20A0A0A6YX66 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Ighv1-20A0A0A6YX66 Gm9207-201ENSMUST00000198773 1115 ntBASIC16.56■□□□□ 0.24
Ighv1-20A0A0A6YX66 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Ighv1-20A0A0A6YX66 Appbp2os-202ENSMUST00000206972 447 ntBASIC16.56■□□□□ 0.24
Ighv1-20A0A0A6YX66 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ighv1-20A0A0A6YX66 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ighv1-20A0A0A6YX66 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC16.56■□□□□ 0.24
Ighv1-20A0A0A6YX66 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Ighv1-20A0A0A6YX66 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC16.56■□□□□ 0.24
Ighv1-20A0A0A6YX66 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ighv1-20A0A0A6YX66 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Ighv1-20A0A0A6YX66 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC16.55■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms