Protein–RNA interactions for Protein: A0A0A6YWV4

Trbc1, T cell receptor beta, constant region 1 (Fragment), mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbc1A0A0A6YWV4 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trbc1A0A0A6YWV4 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC18.85■□□□□ 0.61
Trbc1A0A0A6YWV4 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trbc1A0A0A6YWV4 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
Trbc1A0A0A6YWV4 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Trbc1A0A0A6YWV4 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trbc1A0A0A6YWV4 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trbc1A0A0A6YWV4 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC18.84■□□□□ 0.61
Trbc1A0A0A6YWV4 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC18.84■□□□□ 0.61
Trbc1A0A0A6YWV4 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trbc1A0A0A6YWV4 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trbc1A0A0A6YWV4 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trbc1A0A0A6YWV4 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trbc1A0A0A6YWV4 Gm15043-201ENSMUST00000118843 1543 ntBASIC18.84■□□□□ 0.61
Trbc1A0A0A6YWV4 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Trbc1A0A0A6YWV4 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trbc1A0A0A6YWV4 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Trbc1A0A0A6YWV4 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Trbc1A0A0A6YWV4 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Trbc1A0A0A6YWV4 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC18.83■□□□□ 0.6
Trbc1A0A0A6YWV4 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trbc1A0A0A6YWV4 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trbc1A0A0A6YWV4 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trbc1A0A0A6YWV4 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Trbc1A0A0A6YWV4 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trbc1A0A0A6YWV4 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trbc1A0A0A6YWV4 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Trbc1A0A0A6YWV4 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trbc1A0A0A6YWV4 Iqck-206ENSMUST00000208658 2891 ntBASIC18.82■□□□□ 0.6
Trbc1A0A0A6YWV4 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC18.82■□□□□ 0.6
Trbc1A0A0A6YWV4 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trbc1A0A0A6YWV4 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Trbc1A0A0A6YWV4 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trbc1A0A0A6YWV4 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trbc1A0A0A6YWV4 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
Trbc1A0A0A6YWV4 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC18.81■□□□□ 0.6
Trbc1A0A0A6YWV4 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Trbc1A0A0A6YWV4 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Trbc1A0A0A6YWV4 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trbc1A0A0A6YWV4 Gm4430-201ENSMUST00000192413 1943 ntBASIC18.8■□□□□ 0.6
Trbc1A0A0A6YWV4 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trbc1A0A0A6YWV4 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trbc1A0A0A6YWV4 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trbc1A0A0A6YWV4 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Trbc1A0A0A6YWV4 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC18.8■□□□□ 0.6
Trbc1A0A0A6YWV4 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC18.8■□□□□ 0.6
Trbc1A0A0A6YWV4 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trbc1A0A0A6YWV4 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Trbc1A0A0A6YWV4 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trbc1A0A0A6YWV4 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trbc1A0A0A6YWV4 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trbc1A0A0A6YWV4 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC18.8■□□□□ 0.6
Trbc1A0A0A6YWV4 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trbc1A0A0A6YWV4 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trbc1A0A0A6YWV4 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trbc1A0A0A6YWV4 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trbc1A0A0A6YWV4 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trbc1A0A0A6YWV4 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trbc1A0A0A6YWV4 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Trbc1A0A0A6YWV4 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trbc1A0A0A6YWV4 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trbc1A0A0A6YWV4 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trbc1A0A0A6YWV4 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Trbc1A0A0A6YWV4 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Trbc1A0A0A6YWV4 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trbc1A0A0A6YWV4 Gm22238-201ENSMUST00000175222 88 ntBASIC18.78■□□□□ 0.6
Trbc1A0A0A6YWV4 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trbc1A0A0A6YWV4 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trbc1A0A0A6YWV4 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Trbc1A0A0A6YWV4 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC18.78■□□□□ 0.6
Trbc1A0A0A6YWV4 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trbc1A0A0A6YWV4 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trbc1A0A0A6YWV4 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trbc1A0A0A6YWV4 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Trbc1A0A0A6YWV4 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trbc1A0A0A6YWV4 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Trbc1A0A0A6YWV4 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC18.77■□□□□ 0.6
Trbc1A0A0A6YWV4 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trbc1A0A0A6YWV4 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC18.77■□□□□ 0.6
Trbc1A0A0A6YWV4 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Trbc1A0A0A6YWV4 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC18.77■□□□□ 0.6
Trbc1A0A0A6YWV4 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Trbc1A0A0A6YWV4 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Trbc1A0A0A6YWV4 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trbc1A0A0A6YWV4 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trbc1A0A0A6YWV4 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Trbc1A0A0A6YWV4 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Trbc1A0A0A6YWV4 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trbc1A0A0A6YWV4 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
Trbc1A0A0A6YWV4 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trbc1A0A0A6YWV4 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trbc1A0A0A6YWV4 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC18.75■□□□□ 0.59
Trbc1A0A0A6YWV4 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trbc1A0A0A6YWV4 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trbc1A0A0A6YWV4 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trbc1A0A0A6YWV4 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Trbc1A0A0A6YWV4 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC18.75■□□□□ 0.59
Trbc1A0A0A6YWV4 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC18.75■□□□□ 0.59
Trbc1A0A0A6YWV4 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Trbc1A0A0A6YWV4 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 65.6 ms