Protein–RNA interactions for Protein: A0A075B6C2

Trav13-4-dv7, T cell receptor alpha variable 13-4-DV7 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-4-dv7A0A075B6C2 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trav13-4-dv7A0A075B6C2 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav13-4-dv7A0A075B6C2 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav13-4-dv7A0A075B6C2 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav13-4-dv7A0A075B6C2 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Trav13-4-dv7A0A075B6C2 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav13-4-dv7A0A075B6C2 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav13-4-dv7A0A075B6C2 Gm27502-201ENSMUST00000183495 199 ntBASIC14.08□□□□□ -0.16
Trav13-4-dv7A0A075B6C2 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC14.08□□□□□ -0.16
Trav13-4-dv7A0A075B6C2 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav13-4-dv7A0A075B6C2 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Trav13-4-dv7A0A075B6C2 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trav13-4-dv7A0A075B6C2 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav13-4-dv7A0A075B6C2 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav13-4-dv7A0A075B6C2 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav13-4-dv7A0A075B6C2 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC14.07□□□□□ -0.16
Trav13-4-dv7A0A075B6C2 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trav13-4-dv7A0A075B6C2 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trav13-4-dv7A0A075B6C2 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav13-4-dv7A0A075B6C2 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Trav13-4-dv7A0A075B6C2 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav13-4-dv7A0A075B6C2 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav13-4-dv7A0A075B6C2 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav13-4-dv7A0A075B6C2 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC14.06□□□□□ -0.16
Trav13-4-dv7A0A075B6C2 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trav13-4-dv7A0A075B6C2 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC14.06□□□□□ -0.16
Trav13-4-dv7A0A075B6C2 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC14.06□□□□□ -0.16
Trav13-4-dv7A0A075B6C2 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav13-4-dv7A0A075B6C2 Gm5987-201ENSMUST00000196433 1151 ntBASIC14.06□□□□□ -0.16
Trav13-4-dv7A0A075B6C2 Nsd1-206ENSMUST00000224918 1001 ntBASIC14.06□□□□□ -0.16
Trav13-4-dv7A0A075B6C2 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav13-4-dv7A0A075B6C2 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav13-4-dv7A0A075B6C2 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav13-4-dv7A0A075B6C2 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav13-4-dv7A0A075B6C2 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC14.06□□□□□ -0.16
Trav13-4-dv7A0A075B6C2 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav13-4-dv7A0A075B6C2 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav13-4-dv7A0A075B6C2 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav13-4-dv7A0A075B6C2 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trav13-4-dv7A0A075B6C2 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav13-4-dv7A0A075B6C2 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav13-4-dv7A0A075B6C2 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav13-4-dv7A0A075B6C2 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC14.05□□□□□ -0.16
Trav13-4-dv7A0A075B6C2 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav13-4-dv7A0A075B6C2 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav13-4-dv7A0A075B6C2 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav13-4-dv7A0A075B6C2 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
Trav13-4-dv7A0A075B6C2 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav13-4-dv7A0A075B6C2 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trav13-4-dv7A0A075B6C2 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav13-4-dv7A0A075B6C2 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav13-4-dv7A0A075B6C2 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC14.05□□□□□ -0.16
Trav13-4-dv7A0A075B6C2 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trav13-4-dv7A0A075B6C2 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trav13-4-dv7A0A075B6C2 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Trav13-4-dv7A0A075B6C2 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav13-4-dv7A0A075B6C2 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav13-4-dv7A0A075B6C2 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trav13-4-dv7A0A075B6C2 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Trav13-4-dv7A0A075B6C2 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trav13-4-dv7A0A075B6C2 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav13-4-dv7A0A075B6C2 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav13-4-dv7A0A075B6C2 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC14.04□□□□□ -0.16
Trav13-4-dv7A0A075B6C2 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC14.04□□□□□ -0.16
Trav13-4-dv7A0A075B6C2 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC14.04□□□□□ -0.16
Trav13-4-dv7A0A075B6C2 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav13-4-dv7A0A075B6C2 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Trav13-4-dv7A0A075B6C2 Gm5913-201ENSMUST00000119397 1399 ntBASIC14.04□□□□□ -0.16
Trav13-4-dv7A0A075B6C2 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Trav13-4-dv7A0A075B6C2 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav13-4-dv7A0A075B6C2 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav13-4-dv7A0A075B6C2 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav13-4-dv7A0A075B6C2 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav13-4-dv7A0A075B6C2 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Trav13-4-dv7A0A075B6C2 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav13-4-dv7A0A075B6C2 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav13-4-dv7A0A075B6C2 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav13-4-dv7A0A075B6C2 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
Trav13-4-dv7A0A075B6C2 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav13-4-dv7A0A075B6C2 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav13-4-dv7A0A075B6C2 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav13-4-dv7A0A075B6C2 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav13-4-dv7A0A075B6C2 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav13-4-dv7A0A075B6C2 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav13-4-dv7A0A075B6C2 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trav13-4-dv7A0A075B6C2 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav13-4-dv7A0A075B6C2 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trav13-4-dv7A0A075B6C2 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav13-4-dv7A0A075B6C2 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav13-4-dv7A0A075B6C2 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Trav13-4-dv7A0A075B6C2 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC14.02□□□□□ -0.16
Trav13-4-dv7A0A075B6C2 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav13-4-dv7A0A075B6C2 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav13-4-dv7A0A075B6C2 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
Trav13-4-dv7A0A075B6C2 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav13-4-dv7A0A075B6C2 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav13-4-dv7A0A075B6C2 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav13-4-dv7A0A075B6C2 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Trav13-4-dv7A0A075B6C2 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC14.02□□□□□ -0.17
Trav13-4-dv7A0A075B6C2 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 16.9 ms