Protein–RNA interactions for Protein: A0A075B6A6

Trav6n-7, T cell receptor alpha variable 6N-7 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-7A0A075B6A6 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trav6n-7A0A075B6A6 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Trav6n-7A0A075B6A6 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trav6n-7A0A075B6A6 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trav6n-7A0A075B6A6 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trav6n-7A0A075B6A6 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trav6n-7A0A075B6A6 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trav6n-7A0A075B6A6 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trav6n-7A0A075B6A6 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Trav6n-7A0A075B6A6 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trav6n-7A0A075B6A6 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC17.47■□□□□ 0.39
Trav6n-7A0A075B6A6 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Trav6n-7A0A075B6A6 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trav6n-7A0A075B6A6 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trav6n-7A0A075B6A6 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trav6n-7A0A075B6A6 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Trav6n-7A0A075B6A6 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trav6n-7A0A075B6A6 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC17.46■□□□□ 0.39
Trav6n-7A0A075B6A6 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trav6n-7A0A075B6A6 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trav6n-7A0A075B6A6 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Trav6n-7A0A075B6A6 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Trav6n-7A0A075B6A6 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Trav6n-7A0A075B6A6 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
Trav6n-7A0A075B6A6 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
Trav6n-7A0A075B6A6 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trav6n-7A0A075B6A6 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC17.45■□□□□ 0.38
Trav6n-7A0A075B6A6 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC17.45■□□□□ 0.38
Trav6n-7A0A075B6A6 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC17.45■□□□□ 0.38
Trav6n-7A0A075B6A6 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC17.45■□□□□ 0.38
Trav6n-7A0A075B6A6 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC17.45■□□□□ 0.38
Trav6n-7A0A075B6A6 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trav6n-7A0A075B6A6 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Trav6n-7A0A075B6A6 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC17.44■□□□□ 0.38
Trav6n-7A0A075B6A6 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Trav6n-7A0A075B6A6 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC17.44■□□□□ 0.38
Trav6n-7A0A075B6A6 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trav6n-7A0A075B6A6 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trav6n-7A0A075B6A6 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Trav6n-7A0A075B6A6 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC17.44■□□□□ 0.38
Trav6n-7A0A075B6A6 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trav6n-7A0A075B6A6 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Trav6n-7A0A075B6A6 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Trav6n-7A0A075B6A6 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trav6n-7A0A075B6A6 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trav6n-7A0A075B6A6 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Trav6n-7A0A075B6A6 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Trav6n-7A0A075B6A6 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trav6n-7A0A075B6A6 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trav6n-7A0A075B6A6 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trav6n-7A0A075B6A6 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trav6n-7A0A075B6A6 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trav6n-7A0A075B6A6 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trav6n-7A0A075B6A6 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Trav6n-7A0A075B6A6 Gm22238-201ENSMUST00000175222 88 ntBASIC17.42■□□□□ 0.38
Trav6n-7A0A075B6A6 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC17.42■□□□□ 0.38
Trav6n-7A0A075B6A6 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Trav6n-7A0A075B6A6 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Trav6n-7A0A075B6A6 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trav6n-7A0A075B6A6 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trav6n-7A0A075B6A6 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Trav6n-7A0A075B6A6 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Trav6n-7A0A075B6A6 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trav6n-7A0A075B6A6 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trav6n-7A0A075B6A6 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC17.41■□□□□ 0.38
Trav6n-7A0A075B6A6 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trav6n-7A0A075B6A6 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Trav6n-7A0A075B6A6 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trav6n-7A0A075B6A6 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trav6n-7A0A075B6A6 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Trav6n-7A0A075B6A6 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trav6n-7A0A075B6A6 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Trav6n-7A0A075B6A6 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Trav6n-7A0A075B6A6 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC17.4■□□□□ 0.38
Trav6n-7A0A075B6A6 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC17.4■□□□□ 0.38
Trav6n-7A0A075B6A6 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Trav6n-7A0A075B6A6 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC17.39■□□□□ 0.38
Trav6n-7A0A075B6A6 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Trav6n-7A0A075B6A6 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Trav6n-7A0A075B6A6 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Trav6n-7A0A075B6A6 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC17.39■□□□□ 0.37
Trav6n-7A0A075B6A6 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trav6n-7A0A075B6A6 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC17.39■□□□□ 0.37
Trav6n-7A0A075B6A6 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trav6n-7A0A075B6A6 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Trav6n-7A0A075B6A6 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trav6n-7A0A075B6A6 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trav6n-7A0A075B6A6 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC17.38■□□□□ 0.37
Trav6n-7A0A075B6A6 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trav6n-7A0A075B6A6 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC17.38■□□□□ 0.37
Trav6n-7A0A075B6A6 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trav6n-7A0A075B6A6 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC17.38■□□□□ 0.37
Trav6n-7A0A075B6A6 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trav6n-7A0A075B6A6 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trav6n-7A0A075B6A6 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trav6n-7A0A075B6A6 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC17.37■□□□□ 0.37
Trav6n-7A0A075B6A6 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC17.37■□□□□ 0.37
Trav6n-7A0A075B6A6 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Trav6n-7A0A075B6A6 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trav6n-7A0A075B6A6 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms