Protein–RNA interactions for Protein: A0A075B6A4

Trav12d-3, T cell receptor alpha variable 12D-3 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-3A0A075B6A4 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Trav12d-3A0A075B6A4 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC15.37■□□□□ 0.05
Trav12d-3A0A075B6A4 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Trav12d-3A0A075B6A4 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav12d-3A0A075B6A4 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav12d-3A0A075B6A4 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav12d-3A0A075B6A4 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav12d-3A0A075B6A4 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav12d-3A0A075B6A4 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Trav12d-3A0A075B6A4 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC15.37■□□□□ 0.05
Trav12d-3A0A075B6A4 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav12d-3A0A075B6A4 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav12d-3A0A075B6A4 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav12d-3A0A075B6A4 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav12d-3A0A075B6A4 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Trav12d-3A0A075B6A4 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav12d-3A0A075B6A4 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav12d-3A0A075B6A4 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav12d-3A0A075B6A4 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav12d-3A0A075B6A4 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav12d-3A0A075B6A4 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC15.36■□□□□ 0.05
Trav12d-3A0A075B6A4 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC15.36■□□□□ 0.05
Trav12d-3A0A075B6A4 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav12d-3A0A075B6A4 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav12d-3A0A075B6A4 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Trav12d-3A0A075B6A4 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC15.36■□□□□ 0.05
Trav12d-3A0A075B6A4 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Trav12d-3A0A075B6A4 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Trav12d-3A0A075B6A4 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav12d-3A0A075B6A4 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav12d-3A0A075B6A4 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav12d-3A0A075B6A4 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Trav12d-3A0A075B6A4 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav12d-3A0A075B6A4 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav12d-3A0A075B6A4 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav12d-3A0A075B6A4 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC15.35■□□□□ 0.05
Trav12d-3A0A075B6A4 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC15.35■□□□□ 0.05
Trav12d-3A0A075B6A4 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav12d-3A0A075B6A4 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
Trav12d-3A0A075B6A4 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Trav12d-3A0A075B6A4 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav12d-3A0A075B6A4 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav12d-3A0A075B6A4 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav12d-3A0A075B6A4 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Trav12d-3A0A075B6A4 Golph3-205ENSMUST00000228671 2842 ntBASIC15.34■□□□□ 0.05
Trav12d-3A0A075B6A4 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC15.33■□□□□ 0.05
Trav12d-3A0A075B6A4 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
Trav12d-3A0A075B6A4 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Trav12d-3A0A075B6A4 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Trav12d-3A0A075B6A4 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav12d-3A0A075B6A4 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav12d-3A0A075B6A4 AC153911.1-201ENSMUST00000220378 758 ntBASIC15.33■□□□□ 0.04
Trav12d-3A0A075B6A4 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC15.33■□□□□ 0.04
Trav12d-3A0A075B6A4 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav12d-3A0A075B6A4 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav12d-3A0A075B6A4 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Trav12d-3A0A075B6A4 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav12d-3A0A075B6A4 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav12d-3A0A075B6A4 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav12d-3A0A075B6A4 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC15.33■□□□□ 0.04
Trav12d-3A0A075B6A4 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav12d-3A0A075B6A4 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav12d-3A0A075B6A4 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav12d-3A0A075B6A4 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
Trav12d-3A0A075B6A4 AC158990.1-201ENSMUST00000221450 2016 ntBASIC15.32■□□□□ 0.04
Trav12d-3A0A075B6A4 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav12d-3A0A075B6A4 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Trav12d-3A0A075B6A4 Gm13889-201ENSMUST00000099689 1386 ntBASIC15.32■□□□□ 0.04
Trav12d-3A0A075B6A4 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav12d-3A0A075B6A4 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav12d-3A0A075B6A4 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav12d-3A0A075B6A4 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav12d-3A0A075B6A4 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav12d-3A0A075B6A4 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Trav12d-3A0A075B6A4 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav12d-3A0A075B6A4 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC15.32■□□□□ 0.04
Trav12d-3A0A075B6A4 Gm9812-201ENSMUST00000061934 968 ntBASIC15.31■□□□□ 0.04
Trav12d-3A0A075B6A4 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC15.31■□□□□ 0.04
Trav12d-3A0A075B6A4 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Trav12d-3A0A075B6A4 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav12d-3A0A075B6A4 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav12d-3A0A075B6A4 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav12d-3A0A075B6A4 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav12d-3A0A075B6A4 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav12d-3A0A075B6A4 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav12d-3A0A075B6A4 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav12d-3A0A075B6A4 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Trav12d-3A0A075B6A4 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav12d-3A0A075B6A4 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Trav12d-3A0A075B6A4 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav12d-3A0A075B6A4 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav12d-3A0A075B6A4 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC15.29■□□□□ 0.04
Trav12d-3A0A075B6A4 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav12d-3A0A075B6A4 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trav12d-3A0A075B6A4 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav12d-3A0A075B6A4 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trav12d-3A0A075B6A4 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav12d-3A0A075B6A4 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav12d-3A0A075B6A4 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav12d-3A0A075B6A4 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms