Protein–RNA interactions for Protein: A0A075B649

Trav13-2, T cell receptor alpha variable 13-2 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-2A0A075B649 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Trav13-2A0A075B649 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC13.76□□□□□ -0.21
Trav13-2A0A075B649 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav13-2A0A075B649 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav13-2A0A075B649 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav13-2A0A075B649 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav13-2A0A075B649 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav13-2A0A075B649 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav13-2A0A075B649 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Trav13-2A0A075B649 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC13.75□□□□□ -0.21
Trav13-2A0A075B649 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Trav13-2A0A075B649 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC13.75□□□□□ -0.21
Trav13-2A0A075B649 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav13-2A0A075B649 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Trav13-2A0A075B649 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav13-2A0A075B649 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Trav13-2A0A075B649 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav13-2A0A075B649 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav13-2A0A075B649 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav13-2A0A075B649 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav13-2A0A075B649 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trav13-2A0A075B649 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav13-2A0A075B649 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Trav13-2A0A075B649 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav13-2A0A075B649 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav13-2A0A075B649 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC13.74□□□□□ -0.21
Trav13-2A0A075B649 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav13-2A0A075B649 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav13-2A0A075B649 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trav13-2A0A075B649 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trav13-2A0A075B649 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav13-2A0A075B649 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav13-2A0A075B649 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Trav13-2A0A075B649 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trav13-2A0A075B649 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
Trav13-2A0A075B649 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC13.73□□□□□ -0.21
Trav13-2A0A075B649 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav13-2A0A075B649 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav13-2A0A075B649 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
Trav13-2A0A075B649 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav13-2A0A075B649 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav13-2A0A075B649 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav13-2A0A075B649 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC13.72□□□□□ -0.21
Trav13-2A0A075B649 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trav13-2A0A075B649 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav13-2A0A075B649 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav13-2A0A075B649 Gm11687-201ENSMUST00000118911 886 ntBASIC13.72□□□□□ -0.21
Trav13-2A0A075B649 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav13-2A0A075B649 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav13-2A0A075B649 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav13-2A0A075B649 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav13-2A0A075B649 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trav13-2A0A075B649 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav13-2A0A075B649 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC13.71□□□□□ -0.21
Trav13-2A0A075B649 AC164883.3-201ENSMUST00000227396 1774 ntBASIC13.71□□□□□ -0.21
Trav13-2A0A075B649 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC13.71□□□□□ -0.21
Trav13-2A0A075B649 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav13-2A0A075B649 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC13.71□□□□□ -0.21
Trav13-2A0A075B649 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav13-2A0A075B649 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC13.71□□□□□ -0.22
Trav13-2A0A075B649 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Trav13-2A0A075B649 Snhg20-203ENSMUST00000182811 2153 ntBASIC13.71□□□□□ -0.22
Trav13-2A0A075B649 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trav13-2A0A075B649 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trav13-2A0A075B649 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav13-2A0A075B649 Gm44949-201ENSMUST00000206423 1450 ntBASIC13.7□□□□□ -0.22
Trav13-2A0A075B649 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trav13-2A0A075B649 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC13.7□□□□□ -0.22
Trav13-2A0A075B649 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trav13-2A0A075B649 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Trav13-2A0A075B649 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trav13-2A0A075B649 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav13-2A0A075B649 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav13-2A0A075B649 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav13-2A0A075B649 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav13-2A0A075B649 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Trav13-2A0A075B649 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav13-2A0A075B649 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav13-2A0A075B649 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC13.69□□□□□ -0.22
Trav13-2A0A075B649 AC151971.4-201ENSMUST00000214717 704 ntBASIC13.69□□□□□ -0.22
Trav13-2A0A075B649 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Trav13-2A0A075B649 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav13-2A0A075B649 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav13-2A0A075B649 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Trav13-2A0A075B649 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Trav13-2A0A075B649 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Trav13-2A0A075B649 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav13-2A0A075B649 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav13-2A0A075B649 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav13-2A0A075B649 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC13.68□□□□□ -0.22
Trav13-2A0A075B649 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC13.68□□□□□ -0.22
Trav13-2A0A075B649 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav13-2A0A075B649 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC13.68□□□□□ -0.22
Trav13-2A0A075B649 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav13-2A0A075B649 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav13-2A0A075B649 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav13-2A0A075B649 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Trav13-2A0A075B649 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav13-2A0A075B649 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav13-2A0A075B649 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 16.3 ms