Protein–RNA interactions for Protein: A0A075B641

Trav8-1, T cell receptor alpha variable 8-1 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8-1A0A075B641 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav8-1A0A075B641 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav8-1A0A075B641 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
Trav8-1A0A075B641 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC14.64□□□□□ -0.07
Trav8-1A0A075B641 Gm38342-201ENSMUST00000195710 2980 ntBASIC14.64□□□□□ -0.07
Trav8-1A0A075B641 Gm43403-201ENSMUST00000198011 1786 ntBASIC14.64□□□□□ -0.07
Trav8-1A0A075B641 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Trav8-1A0A075B641 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav8-1A0A075B641 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav8-1A0A075B641 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC14.64□□□□□ -0.07
Trav8-1A0A075B641 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav8-1A0A075B641 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav8-1A0A075B641 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav8-1A0A075B641 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav8-1A0A075B641 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Trav8-1A0A075B641 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Trav8-1A0A075B641 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Trav8-1A0A075B641 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav8-1A0A075B641 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Trav8-1A0A075B641 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav8-1A0A075B641 Gm43545-201ENSMUST00000196765 2779 ntBASIC14.62□□□□□ -0.07
Trav8-1A0A075B641 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav8-1A0A075B641 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav8-1A0A075B641 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav8-1A0A075B641 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC14.62□□□□□ -0.07
Trav8-1A0A075B641 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav8-1A0A075B641 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav8-1A0A075B641 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Trav8-1A0A075B641 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav8-1A0A075B641 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Trav8-1A0A075B641 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC14.61□□□□□ -0.07
Trav8-1A0A075B641 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Trav8-1A0A075B641 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC14.61□□□□□ -0.07
Trav8-1A0A075B641 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC14.61□□□□□ -0.07
Trav8-1A0A075B641 AC122335.2-201ENSMUST00000213901 6181 ntBASIC14.61□□□□□ -0.07
Trav8-1A0A075B641 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav8-1A0A075B641 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav8-1A0A075B641 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Trav8-1A0A075B641 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav8-1A0A075B641 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Trav8-1A0A075B641 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav8-1A0A075B641 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Trav8-1A0A075B641 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav8-1A0A075B641 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Trav8-1A0A075B641 Gm7199-201ENSMUST00000118327 1485 ntBASIC14.6□□□□□ -0.07
Trav8-1A0A075B641 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav8-1A0A075B641 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav8-1A0A075B641 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav8-1A0A075B641 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav8-1A0A075B641 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav8-1A0A075B641 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Trav8-1A0A075B641 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC14.6□□□□□ -0.07
Trav8-1A0A075B641 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav8-1A0A075B641 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav8-1A0A075B641 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Trav8-1A0A075B641 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC14.59□□□□□ -0.07
Trav8-1A0A075B641 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav8-1A0A075B641 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav8-1A0A075B641 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC14.59□□□□□ -0.07
Trav8-1A0A075B641 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Trav8-1A0A075B641 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Trav8-1A0A075B641 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav8-1A0A075B641 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC14.59□□□□□ -0.07
Trav8-1A0A075B641 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Trav8-1A0A075B641 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav8-1A0A075B641 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav8-1A0A075B641 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Trav8-1A0A075B641 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav8-1A0A075B641 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Trav8-1A0A075B641 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.07
Trav8-1A0A075B641 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Trav8-1A0A075B641 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Trav8-1A0A075B641 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav8-1A0A075B641 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav8-1A0A075B641 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Trav8-1A0A075B641 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav8-1A0A075B641 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav8-1A0A075B641 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
Trav8-1A0A075B641 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav8-1A0A075B641 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav8-1A0A075B641 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav8-1A0A075B641 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav8-1A0A075B641 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav8-1A0A075B641 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav8-1A0A075B641 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav8-1A0A075B641 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Trav8-1A0A075B641 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav8-1A0A075B641 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav8-1A0A075B641 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Trav8-1A0A075B641 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Trav8-1A0A075B641 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav8-1A0A075B641 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav8-1A0A075B641 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav8-1A0A075B641 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC14.57□□□□□ -0.08
Trav8-1A0A075B641 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC14.57□□□□□ -0.08
Trav8-1A0A075B641 Gm9939-201ENSMUST00000067161 1154 ntBASIC14.57□□□□□ -0.08
Trav8-1A0A075B641 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav8-1A0A075B641 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav8-1A0A075B641 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
Trav8-1A0A075B641 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 16 ms