Protein–RNA interactions for Protein: A0A075B617

Trav16d-dv11, T cell receptor alpha variable 16D-DV11 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16d-dv11A0A075B617 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
Trav16d-dv11A0A075B617 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
Trav16d-dv11A0A075B617 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Trav16d-dv11A0A075B617 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC15.04■□□□□ -0
Trav16d-dv11A0A075B617 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC15.04■□□□□ -0
Trav16d-dv11A0A075B617 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav16d-dv11A0A075B617 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav16d-dv11A0A075B617 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC15.04■□□□□ -0
Trav16d-dv11A0A075B617 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Trav16d-dv11A0A075B617 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav16d-dv11A0A075B617 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC15.03■□□□□ -0
Trav16d-dv11A0A075B617 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Trav16d-dv11A0A075B617 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav16d-dv11A0A075B617 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav16d-dv11A0A075B617 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC15.03■□□□□ -0
Trav16d-dv11A0A075B617 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC15.03■□□□□ -0
Trav16d-dv11A0A075B617 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav16d-dv11A0A075B617 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC15.03■□□□□ -0
Trav16d-dv11A0A075B617 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav16d-dv11A0A075B617 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Trav16d-dv11A0A075B617 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav16d-dv11A0A075B617 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Trav16d-dv11A0A075B617 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav16d-dv11A0A075B617 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trav16d-dv11A0A075B617 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trav16d-dv11A0A075B617 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC15.02■□□□□ -0
Trav16d-dv11A0A075B617 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC15.02■□□□□ -0
Trav16d-dv11A0A075B617 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC15.02■□□□□ -0
Trav16d-dv11A0A075B617 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC15.02■□□□□ -0
Trav16d-dv11A0A075B617 Gm6821-201ENSMUST00000107540 542 ntBASIC15.02■□□□□ -0
Trav16d-dv11A0A075B617 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC15.02■□□□□ -0
Trav16d-dv11A0A075B617 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC15.02■□□□□ -0
Trav16d-dv11A0A075B617 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC15.02■□□□□ -0
Trav16d-dv11A0A075B617 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC15.02■□□□□ -0
Trav16d-dv11A0A075B617 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trav16d-dv11A0A075B617 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trav16d-dv11A0A075B617 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC15.01□□□□□ -0.01
Trav16d-dv11A0A075B617 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav16d-dv11A0A075B617 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Trav16d-dv11A0A075B617 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Trav16d-dv11A0A075B617 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC15.01□□□□□ -0.01
Trav16d-dv11A0A075B617 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC15.01□□□□□ -0.01
Trav16d-dv11A0A075B617 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Trav16d-dv11A0A075B617 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav16d-dv11A0A075B617 Gm9939-201ENSMUST00000067161 1154 ntBASIC15.01□□□□□ -0.01
Trav16d-dv11A0A075B617 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav16d-dv11A0A075B617 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav16d-dv11A0A075B617 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav16d-dv11A0A075B617 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Trav16d-dv11A0A075B617 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav16d-dv11A0A075B617 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav16d-dv11A0A075B617 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav16d-dv11A0A075B617 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav16d-dv11A0A075B617 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav16d-dv11A0A075B617 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Trav16d-dv11A0A075B617 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Trav16d-dv11A0A075B617 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Trav16d-dv11A0A075B617 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav16d-dv11A0A075B617 AC152827.1-201ENSMUST00000221143 2189 ntBASIC15□□□□□ -0.01
Trav16d-dv11A0A075B617 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Trav16d-dv11A0A075B617 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC15□□□□□ -0.01
Trav16d-dv11A0A075B617 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav16d-dv11A0A075B617 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav16d-dv11A0A075B617 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC15□□□□□ -0.01
Trav16d-dv11A0A075B617 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Trav16d-dv11A0A075B617 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav16d-dv11A0A075B617 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC15□□□□□ -0.01
Trav16d-dv11A0A075B617 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC15□□□□□ -0.01
Trav16d-dv11A0A075B617 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Trav16d-dv11A0A075B617 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav16d-dv11A0A075B617 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC15□□□□□ -0.01
Trav16d-dv11A0A075B617 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav16d-dv11A0A075B617 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav16d-dv11A0A075B617 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC14.99□□□□□ -0.01
Trav16d-dv11A0A075B617 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Trav16d-dv11A0A075B617 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC14.99□□□□□ -0.01
Trav16d-dv11A0A075B617 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC14.99□□□□□ -0.01
Trav16d-dv11A0A075B617 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Trav16d-dv11A0A075B617 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav16d-dv11A0A075B617 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav16d-dv11A0A075B617 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav16d-dv11A0A075B617 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav16d-dv11A0A075B617 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav16d-dv11A0A075B617 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav16d-dv11A0A075B617 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav16d-dv11A0A075B617 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC14.98□□□□□ -0.01
Trav16d-dv11A0A075B617 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav16d-dv11A0A075B617 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav16d-dv11A0A075B617 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav16d-dv11A0A075B617 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav16d-dv11A0A075B617 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav16d-dv11A0A075B617 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav16d-dv11A0A075B617 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC14.98□□□□□ -0.01
Trav16d-dv11A0A075B617 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
Trav16d-dv11A0A075B617 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav16d-dv11A0A075B617 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav16d-dv11A0A075B617 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav16d-dv11A0A075B617 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav16d-dv11A0A075B617 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav16d-dv11A0A075B617 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms