Protein–RNA interactions for Protein: Q9JIS3

Smco4, Single-pass membrane and coiled-coil domain-containing protein 4, mousemouse

Predictions only

Length 59 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco4Q9JIS3 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Smco4Q9JIS3 Spaar-201ENSMUST00000131248 4086 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Smco4Q9JIS3 Ints6l-201ENSMUST00000039374 3766 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Smco4Q9JIS3 Nf2-202ENSMUST00000056290 2394 ntAPPRIS ALT1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Smco4Q9JIS3 Fam47e-202ENSMUST00000131166 1500 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Smco4Q9JIS3 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC9.39□□□□□ -0.91
Smco4Q9JIS3 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC9.39□□□□□ -0.91
Smco4Q9JIS3 Pde6c-202ENSMUST00000112329 2895 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Smco4Q9JIS3 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Smco4Q9JIS3 S1pr2-201ENSMUST00000054197 6394 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Smco4Q9JIS3 Utrn-206ENSMUST00000219003 5751 ntTSL 5 BASIC9.39□□□□□ -0.91
Smco4Q9JIS3 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Smco4Q9JIS3 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Smco4Q9JIS3 Acan-201ENSMUST00000032835 7355 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Smco4Q9JIS3 Dync1h1-201ENSMUST00000018851 14342 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Smco4Q9JIS3 Ddr1-203ENSMUST00000117301 3874 ntAPPRIS P3 TSL 1 (best) BASIC9.39□□□□□ -0.91
Smco4Q9JIS3 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Smco4Q9JIS3 Fbxo8-201ENSMUST00000040218 3571 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Smco4Q9JIS3 Fam13c-201ENSMUST00000062883 3262 ntAPPRIS P3 TSL 1 (best) BASIC9.39□□□□□ -0.91
Smco4Q9JIS3 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Smco4Q9JIS3 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC9.39□□□□□ -0.91
Smco4Q9JIS3 Thbd-201ENSMUST00000099270 3723 ntAPPRIS P1 BASIC9.39□□□□□ -0.91
Smco4Q9JIS3 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC9.39□□□□□ -0.91
Smco4Q9JIS3 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Smco4Q9JIS3 Chd1-201ENSMUST00000024620 3196 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Smco4Q9JIS3 Arhgap24-205ENSMUST00000112853 2853 ntTSL 5 BASIC9.38□□□□□ -0.91
Smco4Q9JIS3 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Smco4Q9JIS3 Gm35850-202ENSMUST00000211705 2120 ntBASIC9.38□□□□□ -0.91
Smco4Q9JIS3 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC9.38□□□□□ -0.91
Smco4Q9JIS3 Gm20796-201ENSMUST00000180355 5838 ntBASIC9.38□□□□□ -0.91
Smco4Q9JIS3 Slc12a6-204ENSMUST00000110991 4556 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Smco4Q9JIS3 Pcdhb9-201ENSMUST00000057228 3055 ntAPPRIS P1 BASIC9.38□□□□□ -0.91
Smco4Q9JIS3 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC9.38□□□□□ -0.91
Smco4Q9JIS3 Mst1r-201ENSMUST00000035203 4722 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Smco4Q9JIS3 Zfp780b-201ENSMUST00000081618 3004 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
Smco4Q9JIS3 Wars-205ENSMUST00000161410 2764 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Smco4Q9JIS3 Gm15172-201ENSMUST00000118945 1046 ntBASIC9.38□□□□□ -0.91
Smco4Q9JIS3 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC9.38□□□□□ -0.91
Smco4Q9JIS3 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Smco4Q9JIS3 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC9.38□□□□□ -0.91
Smco4Q9JIS3 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC9.38□□□□□ -0.91
Smco4Q9JIS3 Gm44297-201ENSMUST00000198304 141 ntBASIC9.38□□□□□ -0.91
Smco4Q9JIS3 Gm5312-201ENSMUST00000203728 547 ntBASIC9.38□□□□□ -0.91
Smco4Q9JIS3 Proz-203ENSMUST00000211363 984 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Smco4Q9JIS3 Gm5035-201ENSMUST00000215581 927 ntBASIC9.38□□□□□ -0.91
Smco4Q9JIS3 Rn7sk-201ENSMUST00000083103 331 ntBASIC9.38□□□□□ -0.91
Smco4Q9JIS3 Gm26315-201ENSMUST00000083890 321 ntBASIC9.38□□□□□ -0.91
Smco4Q9JIS3 Olfr707-205ENSMUST00000214112 1735 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
Smco4Q9JIS3 Ap2b1-201ENSMUST00000018875 5625 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Smco4Q9JIS3 Pop1-202ENSMUST00000079028 3275 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Smco4Q9JIS3 D630003M21Rik-202ENSMUST00000103121 4521 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Smco4Q9JIS3 Srcap-201ENSMUST00000066582 4545 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Smco4Q9JIS3 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC9.38□□□□□ -0.91
Smco4Q9JIS3 Limch1-202ENSMUST00000101164 5192 ntAPPRIS P2 TSL 5 BASIC9.38□□□□□ -0.91
Smco4Q9JIS3 Itgb8-201ENSMUST00000026360 8403 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Smco4Q9JIS3 Kcnip3-203ENSMUST00000103215 2732 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Smco4Q9JIS3 Stox2-206ENSMUST00000210030 2734 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Smco4Q9JIS3 Kcnip3-201ENSMUST00000028850 2728 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Smco4Q9JIS3 Atg9a-205ENSMUST00000188347 4041 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
Smco4Q9JIS3 Lin52-201ENSMUST00000137170 2270 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Smco4Q9JIS3 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Smco4Q9JIS3 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Smco4Q9JIS3 Anln-201ENSMUST00000040912 4605 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Smco4Q9JIS3 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Smco4Q9JIS3 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Smco4Q9JIS3 Olfr764-ps1-201ENSMUST00000204763 2854 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
Smco4Q9JIS3 Ano2-204ENSMUST00000160496 3925 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Smco4Q9JIS3 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC9.37□□□□□ -0.91
Smco4Q9JIS3 Tmco3-201ENSMUST00000045229 4335 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Smco4Q9JIS3 Hrc-201ENSMUST00000085351 2411 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Smco4Q9JIS3 5730455P16Rik-204ENSMUST00000179332 4536 ntAPPRIS ALT2 TSL 5 BASIC9.37□□□□□ -0.91
Smco4Q9JIS3 Oas3-201ENSMUST00000044833 4720 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Smco4Q9JIS3 Pgf-201ENSMUST00000004913 1582 ntAPPRIS P2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Smco4Q9JIS3 Rfesd-201ENSMUST00000050997 2807 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Smco4Q9JIS3 Pcdh15-207ENSMUST00000124046 5336 ntTSL 5 BASIC9.37□□□□□ -0.91
Smco4Q9JIS3 Llgl1-202ENSMUST00000108719 4268 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Smco4Q9JIS3 Prr5l-210ENSMUST00000171088 4296 ntAPPRIS P1 TSL 5 BASIC9.37□□□□□ -0.91
Smco4Q9JIS3 Gpsm1-201ENSMUST00000066889 3432 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Smco4Q9JIS3 Rab11fip4os1-201ENSMUST00000145652 2187 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Smco4Q9JIS3 Phtf1os-201ENSMUST00000160110 4046 ntBASIC9.37□□□□□ -0.91
Smco4Q9JIS3 Exoc4-202ENSMUST00000090381 2598 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Smco4Q9JIS3 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC9.37□□□□□ -0.91
Smco4Q9JIS3 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Smco4Q9JIS3 Gm18210-201ENSMUST00000209001 1524 ntBASIC9.37□□□□□ -0.91
Smco4Q9JIS3 Pigq-219ENSMUST00000208071 2926 ntAPPRIS ALT2 TSL 5 BASIC9.37□□□□□ -0.91
Smco4Q9JIS3 Usp45-201ENSMUST00000040429 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Smco4Q9JIS3 Olfr239-202ENSMUST00000213731 3690 ntTSL 5 BASIC9.37□□□□□ -0.91
Smco4Q9JIS3 Armcx3-203ENSMUST00000086884 3488 ntAPPRIS P1 TSL 5 BASIC9.37□□□□□ -0.91
Smco4Q9JIS3 Pram1-201ENSMUST00000052079 2278 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Smco4Q9JIS3 Dchs1-201ENSMUST00000078482 10754 ntAPPRIS P1 TSL 5 BASIC9.37□□□□□ -0.91
Smco4Q9JIS3 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Smco4Q9JIS3 Uaca-202ENSMUST00000214354 4417 ntAPPRIS ALT2 TSL 5 BASIC9.37□□□□□ -0.91
Smco4Q9JIS3 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC9.37□□□□□ -0.91
Smco4Q9JIS3 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Smco4Q9JIS3 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Smco4Q9JIS3 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Smco4Q9JIS3 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC9.37□□□□□ -0.91
Smco4Q9JIS3 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Smco4Q9JIS3 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Smco4Q9JIS3 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC9.37□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms