Protein–RNA interactions for Protein: Q9ES34

Ube3b, Ubiquitin-protein ligase E3B, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3bQ9ES34 Gm16178-201ENSMUST00000129408 677 ntTSL 2 BASIC14.04□□□□□ -0.16
Ube3bQ9ES34 9430093N23Rik-201ENSMUST00000152494 515 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Ube3bQ9ES34 Slpi-202ENSMUST00000165980 488 ntAPPRIS ALT2 TSL 3 BASIC14.04□□□□□ -0.16
Ube3bQ9ES34 C730034F03Rik-201ENSMUST00000168646 1280 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Ube3bQ9ES34 Gm17391-201ENSMUST00000171036 126 ntBASIC14.04□□□□□ -0.16
Ube3bQ9ES34 Gm27241-202ENSMUST00000185013 570 ntTSL 2 BASIC14.04□□□□□ -0.16
Ube3bQ9ES34 Gm37641-201ENSMUST00000193837 239 ntBASIC14.04□□□□□ -0.16
Ube3bQ9ES34 Olfr1380-201ENSMUST00000204300 938 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Ube3bQ9ES34 Gm45462-201ENSMUST00000211267 792 ntTSL 5 BASIC14.04□□□□□ -0.16
Ube3bQ9ES34 Gm10318-202ENSMUST00000217996 639 ntTSL 5 BASIC14.04□□□□□ -0.16
Ube3bQ9ES34 CT010465.1-201ENSMUST00000222463 809 ntTSL 5 BASIC14.04□□□□□ -0.16
Ube3bQ9ES34 Clec4b1-202ENSMUST00000078559 748 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ube3bQ9ES34 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ube3bQ9ES34 EU599041-202ENSMUST00000205291 1386 ntTSL 5 BASIC14.04□□□□□ -0.16
Ube3bQ9ES34 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ube3bQ9ES34 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ube3bQ9ES34 Ptprm-203ENSMUST00000224091 3773 ntBASIC14.04□□□□□ -0.16
Ube3bQ9ES34 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Ube3bQ9ES34 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ube3bQ9ES34 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
Ube3bQ9ES34 Rpl15-202ENSMUST00000080281 1922 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ube3bQ9ES34 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Ube3bQ9ES34 Gm18986-201ENSMUST00000216029 1986 ntBASIC14.03□□□□□ -0.16
Ube3bQ9ES34 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ube3bQ9ES34 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ube3bQ9ES34 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ube3bQ9ES34 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Ube3bQ9ES34 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Ube3bQ9ES34 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ube3bQ9ES34 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ube3bQ9ES34 Urad-201ENSMUST00000100433 766 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ube3bQ9ES34 Tcea3-201ENSMUST00000102533 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ube3bQ9ES34 Rwdd3-205ENSMUST00000106467 1158 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ube3bQ9ES34 Gsto2-202ENSMUST00000120645 1277 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ube3bQ9ES34 Spx-202ENSMUST00000126521 357 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
Ube3bQ9ES34 Gm4654-201ENSMUST00000183305 982 ntBASIC14.03□□□□□ -0.16
Ube3bQ9ES34 Dusp13-211ENSMUST00000183943 779 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Ube3bQ9ES34 Ighv5-11-201ENSMUST00000193354 371 ntBASIC14.03□□□□□ -0.16
Ube3bQ9ES34 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ube3bQ9ES34 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC14.03□□□□□ -0.16
Ube3bQ9ES34 9430078K24Rik-201ENSMUST00000218818 1082 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ube3bQ9ES34 AC154517.1-201ENSMUST00000222785 629 ntTSL 3 BASIC14.03□□□□□ -0.16
Ube3bQ9ES34 1700013F07Rik-201ENSMUST00000029485 661 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ube3bQ9ES34 Rdh16f2-201ENSMUST00000092058 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ube3bQ9ES34 Cd55b-201ENSMUST00000112488 1325 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ube3bQ9ES34 Platr7-201ENSMUST00000181466 1334 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ube3bQ9ES34 Gm37965-201ENSMUST00000195304 1362 ntBASIC14.03□□□□□ -0.16
Ube3bQ9ES34 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ube3bQ9ES34 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC14.03□□□□□ -0.16
Ube3bQ9ES34 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ube3bQ9ES34 Rad51c-201ENSMUST00000007790 1632 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ube3bQ9ES34 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ube3bQ9ES34 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ube3bQ9ES34 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ube3bQ9ES34 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Ube3bQ9ES34 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ube3bQ9ES34 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ube3bQ9ES34 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ube3bQ9ES34 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ube3bQ9ES34 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ube3bQ9ES34 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Ube3bQ9ES34 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ube3bQ9ES34 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Ube3bQ9ES34 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ube3bQ9ES34 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC14.02□□□□□ -0.16
Ube3bQ9ES34 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Ube3bQ9ES34 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Ube3bQ9ES34 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Ube3bQ9ES34 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ube3bQ9ES34 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Ube3bQ9ES34 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ube3bQ9ES34 Anxa4-202ENSMUST00000113675 2030 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ube3bQ9ES34 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Ube3bQ9ES34 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.16
Ube3bQ9ES34 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Ube3bQ9ES34 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Ube3bQ9ES34 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Ube3bQ9ES34 Gm14150-201ENSMUST00000122404 1354 ntBASIC14.02□□□□□ -0.17
Ube3bQ9ES34 Sparc-209ENSMUST00000216313 1304 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Ube3bQ9ES34 Gm14585-201ENSMUST00000120713 634 ntBASIC14.02□□□□□ -0.17
Ube3bQ9ES34 Gm11944-201ENSMUST00000152576 873 ntTSL 3 BASIC14.02□□□□□ -0.17
Ube3bQ9ES34 Gm6548-201ENSMUST00000167498 1165 ntBASIC14.02□□□□□ -0.17
Ube3bQ9ES34 Mrpl23-ps1-201ENSMUST00000173086 580 ntBASIC14.02□□□□□ -0.17
Ube3bQ9ES34 Gm20662-201ENSMUST00000176356 601 ntAPPRIS P5 TSL 3 BASIC14.02□□□□□ -0.17
Ube3bQ9ES34 Stpg4-202ENSMUST00000186211 591 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.17
Ube3bQ9ES34 Gm43186-201ENSMUST00000198130 824 ntBASIC14.02□□□□□ -0.17
Ube3bQ9ES34 Gm45398-201ENSMUST00000210561 165 ntBASIC14.02□□□□□ -0.17
Ube3bQ9ES34 Gm2517-201ENSMUST00000215651 348 ntBASIC14.02□□□□□ -0.17
Ube3bQ9ES34 Gm18065-201ENSMUST00000221395 526 ntBASIC14.02□□□□□ -0.17
Ube3bQ9ES34 AC164437.3-201ENSMUST00000228323 347 ntBASIC14.02□□□□□ -0.17
Ube3bQ9ES34 Gm4978-201ENSMUST00000071565 801 ntBASIC14.02□□□□□ -0.17
Ube3bQ9ES34 Actg-ps1-201ENSMUST00000099636 1124 ntBASIC14.02□□□□□ -0.17
Ube3bQ9ES34 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Ube3bQ9ES34 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ube3bQ9ES34 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ube3bQ9ES34 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Ube3bQ9ES34 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ube3bQ9ES34 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Ube3bQ9ES34 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ube3bQ9ES34 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 52.4 ms