Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 Crispld2-201ENSMUST00000034282 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trim13Q9CYB0 Ptpn23-201ENSMUST00000040021 5346 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Trim13Q9CYB0 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trim13Q9CYB0 Sh3tc2-201ENSMUST00000051720 4536 ntAPPRIS P1 TSL 2 BASIC10.91□□□□□ -0.66
Trim13Q9CYB0 Ptgr2-207ENSMUST00000146377 2073 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trim13Q9CYB0 Gm4869-201ENSMUST00000197549 2955 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Trim13Q9CYB0 Pck2-207ENSMUST00000226519 4625 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Trim13Q9CYB0 Clcn4-201ENSMUST00000000619 4607 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trim13Q9CYB0 Gm26510-201ENSMUST00000180468 1796 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Trim13Q9CYB0 Map3k12-208ENSMUST00000171565 4318 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trim13Q9CYB0 Tbc1d14-204ENSMUST00000130417 2665 ntTSL 5 BASIC10.91□□□□□ -0.66
Trim13Q9CYB0 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trim13Q9CYB0 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trim13Q9CYB0 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Trim13Q9CYB0 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC10.91□□□□□ -0.66
Trim13Q9CYB0 6530401F13Rik-201ENSMUST00000166971 1090 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Trim13Q9CYB0 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trim13Q9CYB0 Gm8738-201ENSMUST00000172606 329 ntBASIC10.91□□□□□ -0.66
Trim13Q9CYB0 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Trim13Q9CYB0 Pid1-205ENSMUST00000176720 450 ntTSL 5 BASIC10.91□□□□□ -0.66
Trim13Q9CYB0 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trim13Q9CYB0 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trim13Q9CYB0 Gm43773-201ENSMUST00000198548 2162 ntBASIC10.91□□□□□ -0.66
Trim13Q9CYB0 Trip4-202ENSMUST00000119245 4211 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trim13Q9CYB0 Pcdha6-201ENSMUST00000193389 4653 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trim13Q9CYB0 Calm1-201ENSMUST00000001204 3987 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Trim13Q9CYB0 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Trim13Q9CYB0 Gm8706-201ENSMUST00000197372 1491 ntBASIC10.91□□□□□ -0.66
Trim13Q9CYB0 Zscan30-202ENSMUST00000224144 1458 ntBASIC10.91□□□□□ -0.66
Trim13Q9CYB0 Tat-201ENSMUST00000001720 2375 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trim13Q9CYB0 Fam84a-201ENSMUST00000020926 4164 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trim13Q9CYB0 Dbh-201ENSMUST00000000910 2552 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trim13Q9CYB0 Psd2-203ENSMUST00000175734 4300 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trim13Q9CYB0 Ticam2-201ENSMUST00000070084 2340 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trim13Q9CYB0 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trim13Q9CYB0 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Trim13Q9CYB0 Nup50-201ENSMUST00000165443 4741 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trim13Q9CYB0 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trim13Q9CYB0 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC10.91□□□□□ -0.66
Trim13Q9CYB0 Nefl-201ENSMUST00000022639 3380 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trim13Q9CYB0 Bdkrb2-201ENSMUST00000001652 3792 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trim13Q9CYB0 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trim13Q9CYB0 Mmel1-203ENSMUST00000105634 2669 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Trim13Q9CYB0 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trim13Q9CYB0 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trim13Q9CYB0 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Trim13Q9CYB0 Tnip1-201ENSMUST00000018482 2810 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trim13Q9CYB0 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Trim13Q9CYB0 Fam107b-201ENSMUST00000027965 3156 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trim13Q9CYB0 Gtf2i-224ENSMUST00000174772 4078 ntAPPRIS ALT2 TSL 2 BASIC10.9□□□□□ -0.66
Trim13Q9CYB0 Zc3h18-205ENSMUST00000176629 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trim13Q9CYB0 Adamts13-201ENSMUST00000014996 3474 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Trim13Q9CYB0 Metap2-208ENSMUST00000181091 1876 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Trim13Q9CYB0 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trim13Q9CYB0 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Trim13Q9CYB0 Gm24934-201ENSMUST00000103764 111 ntBASIC10.9□□□□□ -0.66
Trim13Q9CYB0 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trim13Q9CYB0 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Trim13Q9CYB0 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trim13Q9CYB0 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trim13Q9CYB0 Gm29127-201ENSMUST00000188304 517 ntBASIC10.9□□□□□ -0.66
Trim13Q9CYB0 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Trim13Q9CYB0 Gm38230-201ENSMUST00000193572 1159 ntBASIC10.9□□□□□ -0.66
Trim13Q9CYB0 Gm42937-201ENSMUST00000197360 752 ntBASIC10.9□□□□□ -0.66
Trim13Q9CYB0 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC10.9□□□□□ -0.66
Trim13Q9CYB0 Gm39317-201ENSMUST00000213360 1138 ntTSL 5 BASIC10.9□□□□□ -0.66
Trim13Q9CYB0 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC10.9□□□□□ -0.66
Trim13Q9CYB0 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trim13Q9CYB0 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trim13Q9CYB0 Gm25857-201ENSMUST00000082788 129 ntBASIC10.9□□□□□ -0.66
Trim13Q9CYB0 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC10.9□□□□□ -0.66
Trim13Q9CYB0 Hmgb1-202ENSMUST00000093196 1092 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trim13Q9CYB0 Zfp866-202ENSMUST00000137573 3245 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trim13Q9CYB0 Atp9b-201ENSMUST00000091790 5357 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
Trim13Q9CYB0 Gm38055-201ENSMUST00000195353 2217 ntBASIC10.9□□□□□ -0.66
Trim13Q9CYB0 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Trim13Q9CYB0 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trim13Q9CYB0 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trim13Q9CYB0 Zfp41-204ENSMUST00000161785 3540 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trim13Q9CYB0 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trim13Q9CYB0 Astn1-209ENSMUST00000194369 3344 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Trim13Q9CYB0 Anxa7-202ENSMUST00000100844 2904 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trim13Q9CYB0 Steap3-201ENSMUST00000112639 2931 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trim13Q9CYB0 Klhl29-202ENSMUST00000218384 2716 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Trim13Q9CYB0 Gm15411-201ENSMUST00000133243 3488 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Trim13Q9CYB0 Mical1-202ENSMUST00000099934 3292 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
Trim13Q9CYB0 Lamc2-203ENSMUST00000185356 4916 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Trim13Q9CYB0 Anks1b-218ENSMUST00000182595 3715 ntTSL 5 BASIC10.89□□□□□ -0.67
Trim13Q9CYB0 Aldh3a1-202ENSMUST00000108716 1721 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trim13Q9CYB0 Slc25a42-202ENSMUST00000110127 3196 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Trim13Q9CYB0 Stxbp5l-204ENSMUST00000114781 3544 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Trim13Q9CYB0 Zfp629-203ENSMUST00000122066 5850 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trim13Q9CYB0 Otog-201ENSMUST00000164538 10043 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Trim13Q9CYB0 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Trim13Q9CYB0 Cbfa2t3-203ENSMUST00000127984 7645 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trim13Q9CYB0 Gm33677-201ENSMUST00000220074 2765 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Trim13Q9CYB0 Mical2-202ENSMUST00000050149 6669 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trim13Q9CYB0 Fmnl1-207ENSMUST00000218163 3824 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Trim13Q9CYB0 Tardbp-209ENSMUST00000165113 6495 ntTSL 5 BASIC10.89□□□□□ -0.67
Trim13Q9CYB0 Gm5620-201ENSMUST00000077991 1348 ntBASIC10.89□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms