Protein–RNA interactions for Protein: Q9CQX5

Cldnd1, Claudin domain-containing protein 1, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldnd1Q9CQX5 D730050B12Rik-201ENSMUST00000223149 585 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Cldnd1Q9CQX5 Gm14005-208ENSMUST00000223654 681 ntBASIC12.06□□□□□ -0.48
Cldnd1Q9CQX5 CT010506.1-201ENSMUST00000223673 349 ntBASIC12.06□□□□□ -0.48
Cldnd1Q9CQX5 AC164437.3-201ENSMUST00000228323 347 ntBASIC12.06□□□□□ -0.48
Cldnd1Q9CQX5 Olfr692-201ENSMUST00000098152 1126 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Cldnd1Q9CQX5 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cldnd1Q9CQX5 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cldnd1Q9CQX5 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cldnd1Q9CQX5 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC12.06□□□□□ -0.48
Cldnd1Q9CQX5 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cldnd1Q9CQX5 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC12.06□□□□□ -0.48
Cldnd1Q9CQX5 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cldnd1Q9CQX5 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cldnd1Q9CQX5 Gm44152-201ENSMUST00000205007 1691 ntBASIC12.06□□□□□ -0.48
Cldnd1Q9CQX5 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC12.06□□□□□ -0.48
Cldnd1Q9CQX5 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Cldnd1Q9CQX5 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Cldnd1Q9CQX5 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Cldnd1Q9CQX5 E330034L11Rik-201ENSMUST00000200640 1742 ntBASIC12.06□□□□□ -0.48
Cldnd1Q9CQX5 Il1f5-205ENSMUST00000147885 1392 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Cldnd1Q9CQX5 Airn-205ENSMUST00000161890 1375 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Cldnd1Q9CQX5 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cldnd1Q9CQX5 Oma1-201ENSMUST00000035780 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cldnd1Q9CQX5 Tmem138-201ENSMUST00000025568 1590 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cldnd1Q9CQX5 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cldnd1Q9CQX5 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cldnd1Q9CQX5 Gm43417-201ENSMUST00000201586 5207 ntBASIC12.05□□□□□ -0.48
Cldnd1Q9CQX5 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cldnd1Q9CQX5 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cldnd1Q9CQX5 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cldnd1Q9CQX5 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cldnd1Q9CQX5 Cbx7-202ENSMUST00000109615 710 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Cldnd1Q9CQX5 Banf2-202ENSMUST00000110032 409 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cldnd1Q9CQX5 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC12.05□□□□□ -0.48
Cldnd1Q9CQX5 Eef1d-207ENSMUST00000116440 896 ntAPPRIS ALT2 TSL 3 BASIC12.05□□□□□ -0.48
Cldnd1Q9CQX5 Gm11996-201ENSMUST00000117538 915 ntBASIC12.05□□□□□ -0.48
Cldnd1Q9CQX5 Gm14198-201ENSMUST00000153208 948 ntTSL 2 BASIC12.05□□□□□ -0.48
Cldnd1Q9CQX5 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Cldnd1Q9CQX5 Gm9192-201ENSMUST00000183221 985 ntBASIC12.05□□□□□ -0.48
Cldnd1Q9CQX5 Gm43969-201ENSMUST00000204833 535 ntBASIC12.05□□□□□ -0.48
Cldnd1Q9CQX5 Gm6855-201ENSMUST00000206307 790 ntBASIC12.05□□□□□ -0.48
Cldnd1Q9CQX5 Adipoq-201ENSMUST00000023593 1292 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cldnd1Q9CQX5 Banf2-201ENSMUST00000037722 571 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cldnd1Q9CQX5 Gm3755-201ENSMUST00000169555 1462 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Cldnd1Q9CQX5 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cldnd1Q9CQX5 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cldnd1Q9CQX5 AC093022.4-203ENSMUST00000228523 2657 ntBASIC12.05□□□□□ -0.48
Cldnd1Q9CQX5 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Cldnd1Q9CQX5 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cldnd1Q9CQX5 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cldnd1Q9CQX5 Uba6-202ENSMUST00000113373 3504 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cldnd1Q9CQX5 Gm37019-201ENSMUST00000192133 2134 ntBASIC12.05□□□□□ -0.48
Cldnd1Q9CQX5 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cldnd1Q9CQX5 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cldnd1Q9CQX5 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cldnd1Q9CQX5 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cldnd1Q9CQX5 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC12.04□□□□□ -0.48
Cldnd1Q9CQX5 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cldnd1Q9CQX5 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cldnd1Q9CQX5 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Cldnd1Q9CQX5 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cldnd1Q9CQX5 Gm1840-201ENSMUST00000051687 1432 ntBASIC12.04□□□□□ -0.48
Cldnd1Q9CQX5 Gabarapl2-201ENSMUST00000034428 1677 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cldnd1Q9CQX5 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Cldnd1Q9CQX5 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cldnd1Q9CQX5 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Cldnd1Q9CQX5 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cldnd1Q9CQX5 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cldnd1Q9CQX5 Vsir-202ENSMUST00000105459 1290 ntTSL 5 BASIC12.04□□□□□ -0.48
Cldnd1Q9CQX5 Snrnp25-202ENSMUST00000121182 659 ntAPPRIS ALT2 TSL 3 BASIC12.04□□□□□ -0.48
Cldnd1Q9CQX5 Ndufb5-204ENSMUST00000127477 1079 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cldnd1Q9CQX5 Gm16030-201ENSMUST00000159098 603 ntBASIC12.04□□□□□ -0.48
Cldnd1Q9CQX5 Gm25677-201ENSMUST00000174983 72 ntBASIC12.04□□□□□ -0.48
Cldnd1Q9CQX5 Gm4895-201ENSMUST00000181646 1137 ntBASIC12.04□□□□□ -0.48
Cldnd1Q9CQX5 Gm42430-201ENSMUST00000197209 616 ntBASIC12.04□□□□□ -0.48
Cldnd1Q9CQX5 Gm44216-201ENSMUST00000203942 157 ntBASIC12.04□□□□□ -0.48
Cldnd1Q9CQX5 Gm17825-201ENSMUST00000206836 794 ntBASIC12.04□□□□□ -0.48
Cldnd1Q9CQX5 AC123694.1-201ENSMUST00000219525 644 ntTSL 5 BASIC12.04□□□□□ -0.48
Cldnd1Q9CQX5 AC158388.3-202ENSMUST00000225517 775 ntBASIC12.04□□□□□ -0.48
Cldnd1Q9CQX5 AC154532.1-201ENSMUST00000227860 965 ntBASIC12.04□□□□□ -0.48
Cldnd1Q9CQX5 Tsga10ip-201ENSMUST00000044527 487 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cldnd1Q9CQX5 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Cldnd1Q9CQX5 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Cldnd1Q9CQX5 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Cldnd1Q9CQX5 Plekha6-203ENSMUST00000186917 4820 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cldnd1Q9CQX5 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cldnd1Q9CQX5 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Cldnd1Q9CQX5 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC12.04□□□□□ -0.48
Cldnd1Q9CQX5 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Cldnd1Q9CQX5 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cldnd1Q9CQX5 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cldnd1Q9CQX5 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cldnd1Q9CQX5 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cldnd1Q9CQX5 Cd55b-201ENSMUST00000112488 1325 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cldnd1Q9CQX5 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cldnd1Q9CQX5 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cldnd1Q9CQX5 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cldnd1Q9CQX5 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Cldnd1Q9CQX5 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cldnd1Q9CQX5 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 285.7 ms