Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC11.13□□□□□ -0.63
Nkx6-1Q99MA9 Oc90-202ENSMUST00000079776 1670 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Nkx6-1Q99MA9 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Nkx6-1Q99MA9 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Nkx6-1Q99MA9 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Nkx6-1Q99MA9 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Nkx6-1Q99MA9 Gm43807-201ENSMUST00000200678 1781 ntBASIC11.13□□□□□ -0.63
Nkx6-1Q99MA9 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Nkx6-1Q99MA9 Bmp4-202ENSMUST00000100676 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Nkx6-1Q99MA9 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Nkx6-1Q99MA9 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Nkx6-1Q99MA9 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Nkx6-1Q99MA9 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Nkx6-1Q99MA9 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Nkx6-1Q99MA9 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Nkx6-1Q99MA9 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Nkx6-1Q99MA9 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Nkx6-1Q99MA9 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Nkx6-1Q99MA9 Gm12940-202ENSMUST00000137236 1970 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Nkx6-1Q99MA9 Gm37131-201ENSMUST00000192502 1561 ntBASIC11.12□□□□□ -0.63
Nkx6-1Q99MA9 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Nkx6-1Q99MA9 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Nkx6-1Q99MA9 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Nkx6-1Q99MA9 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Nkx6-1Q99MA9 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC11.12□□□□□ -0.63
Nkx6-1Q99MA9 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Nkx6-1Q99MA9 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Nkx6-1Q99MA9 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Nkx6-1Q99MA9 Acnat1-202ENSMUST00000107697 1446 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Nkx6-1Q99MA9 Nxf2-202ENSMUST00000113187 2316 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Nkx6-1Q99MA9 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Nkx6-1Q99MA9 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Nkx6-1Q99MA9 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Nkx6-1Q99MA9 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Nkx6-1Q99MA9 Ralyl-202ENSMUST00000108373 267 ntTSL 5 BASIC11.12□□□□□ -0.63
Nkx6-1Q99MA9 Olfr1258-202ENSMUST00000111516 936 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Nkx6-1Q99MA9 Gm12856-201ENSMUST00000119471 1293 ntBASIC11.12□□□□□ -0.63
Nkx6-1Q99MA9 Gm12943-201ENSMUST00000119616 210 ntBASIC11.12□□□□□ -0.63
Nkx6-1Q99MA9 Gm11354-201ENSMUST00000121974 422 ntBASIC11.12□□□□□ -0.63
Nkx6-1Q99MA9 Gm13166-201ENSMUST00000123828 940 ntTSL 5 BASIC11.12□□□□□ -0.63
Nkx6-1Q99MA9 Gm15409-201ENSMUST00000135240 520 ntTSL 2 BASIC11.12□□□□□ -0.63
Nkx6-1Q99MA9 Gm13236-201ENSMUST00000153010 940 ntTSL 5 BASIC11.12□□□□□ -0.63
Nkx6-1Q99MA9 Gm22146-201ENSMUST00000157397 288 ntBASIC11.12□□□□□ -0.63
Nkx6-1Q99MA9 Gm29560-201ENSMUST00000191526 881 ntTSL 5 BASIC11.12□□□□□ -0.63
Nkx6-1Q99MA9 Gm8574-201ENSMUST00000203207 924 ntBASIC11.12□□□□□ -0.63
Nkx6-1Q99MA9 Gm44647-201ENSMUST00000207402 428 ntBASIC11.12□□□□□ -0.63
Nkx6-1Q99MA9 Gm6108-201ENSMUST00000208365 367 ntBASIC11.12□□□□□ -0.63
Nkx6-1Q99MA9 Folr2-203ENSMUST00000210598 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Nkx6-1Q99MA9 Gm45338-206ENSMUST00000211460 1155 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Nkx6-1Q99MA9 Gm45856-201ENSMUST00000212752 416 ntBASIC11.12□□□□□ -0.63
Nkx6-1Q99MA9 AC154361.2-201ENSMUST00000224747 943 ntBASIC11.12□□□□□ -0.63
Nkx6-1Q99MA9 Ccdc28b-201ENSMUST00000030586 879 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Nkx6-1Q99MA9 Gm8894-201ENSMUST00000074642 666 ntBASIC11.12□□□□□ -0.63
Nkx6-1Q99MA9 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Nkx6-1Q99MA9 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Nkx6-1Q99MA9 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Nkx6-1Q99MA9 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Nkx6-1Q99MA9 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Nkx6-1Q99MA9 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Nkx6-1Q99MA9 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Nkx6-1Q99MA9 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Nkx6-1Q99MA9 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC11.12□□□□□ -0.63
Nkx6-1Q99MA9 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC11.12□□□□□ -0.63
Nkx6-1Q99MA9 Gm43339-201ENSMUST00000200032 1606 ntBASIC11.12□□□□□ -0.63
Nkx6-1Q99MA9 Gm4780-202ENSMUST00000215200 2644 ntBASIC11.12□□□□□ -0.63
Nkx6-1Q99MA9 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Nkx6-1Q99MA9 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Nkx6-1Q99MA9 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Nkx6-1Q99MA9 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Nkx6-1Q99MA9 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Nkx6-1Q99MA9 Apon-202ENSMUST00000218722 1747 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Nkx6-1Q99MA9 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Nkx6-1Q99MA9 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Nkx6-1Q99MA9 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Nkx6-1Q99MA9 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Nkx6-1Q99MA9 Ndufaf1-203ENSMUST00000110802 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Nkx6-1Q99MA9 Gm16237-201ENSMUST00000156666 1319 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Nkx6-1Q99MA9 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Nkx6-1Q99MA9 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Nkx6-1Q99MA9 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Nkx6-1Q99MA9 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Nkx6-1Q99MA9 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Nkx6-1Q99MA9 Rnf183-203ENSMUST00000107455 1432 ntAPPRIS P1 TSL 3 BASIC11.11□□□□□ -0.63
Nkx6-1Q99MA9 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC11.11□□□□□ -0.63
Nkx6-1Q99MA9 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC11.11□□□□□ -0.63
Nkx6-1Q99MA9 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC11.11□□□□□ -0.63
Nkx6-1Q99MA9 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Nkx6-1Q99MA9 Srsf5-201ENSMUST00000094693 1527 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Nkx6-1Q99MA9 Cog3-203ENSMUST00000227473 4197 ntBASIC11.11□□□□□ -0.63
Nkx6-1Q99MA9 Gm23272-201ENSMUST00000104053 129 ntBASIC11.11□□□□□ -0.63
Nkx6-1Q99MA9 Nudt1-205ENSMUST00000110827 744 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Nkx6-1Q99MA9 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Nkx6-1Q99MA9 Gm13351-201ENSMUST00000118087 414 ntBASIC11.11□□□□□ -0.63
Nkx6-1Q99MA9 Rpl9-ps7-201ENSMUST00000140507 579 ntBASIC11.11□□□□□ -0.63
Nkx6-1Q99MA9 Gm38389-201ENSMUST00000147871 653 ntTSL 3 BASIC11.11□□□□□ -0.63
Nkx6-1Q99MA9 Gm16876-201ENSMUST00000151945 760 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Nkx6-1Q99MA9 1700099I09Rik-201ENSMUST00000167834 769 ntTSL 2 BASIC11.11□□□□□ -0.63
Nkx6-1Q99MA9 Gm26989-201ENSMUST00000182608 749 ntBASIC11.11□□□□□ -0.63
Nkx6-1Q99MA9 Gm29040-201ENSMUST00000189899 1188 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Nkx6-1Q99MA9 A930036K24Rik-201ENSMUST00000194146 1200 ntBASIC11.11□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms