Protein–RNA interactions for Protein: Q8VIM6

Strc, Stereocilin, mousemouse

Predictions only

Length 1,809 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
StrcQ8VIM6 Tstd2-201ENSMUST00000107770 2700 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
StrcQ8VIM6 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
StrcQ8VIM6 Wfdc8-202ENSMUST00000109338 1794 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
StrcQ8VIM6 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC13.67□□□□□ -0.22
StrcQ8VIM6 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
StrcQ8VIM6 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC13.67□□□□□ -0.22
StrcQ8VIM6 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
StrcQ8VIM6 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
StrcQ8VIM6 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
StrcQ8VIM6 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
StrcQ8VIM6 Gm7224-201ENSMUST00000121359 2066 ntBASIC13.67□□□□□ -0.22
StrcQ8VIM6 4921507G05Rik-201ENSMUST00000181348 1653 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
StrcQ8VIM6 Gm12009-201ENSMUST00000121361 1100 ntBASIC13.67□□□□□ -0.22
StrcQ8VIM6 Ppt1-204ENSMUST00000121870 986 ntTSL 2 BASIC13.67□□□□□ -0.22
StrcQ8VIM6 Gm4775-201ENSMUST00000169588 402 ntBASIC13.67□□□□□ -0.22
StrcQ8VIM6 n-R5s130-201ENSMUST00000178128 119 ntBASIC13.67□□□□□ -0.22
StrcQ8VIM6 Gm24312-201ENSMUST00000178677 119 ntBASIC13.67□□□□□ -0.22
StrcQ8VIM6 n-R5s106-201ENSMUST00000179060 119 ntBASIC13.67□□□□□ -0.22
StrcQ8VIM6 n-R5s118-201ENSMUST00000179887 119 ntBASIC13.67□□□□□ -0.22
StrcQ8VIM6 Zcwpw2-203ENSMUST00000187803 372 ntBASIC13.67□□□□□ -0.22
StrcQ8VIM6 Gm19918-201ENSMUST00000194858 400 ntBASIC13.67□□□□□ -0.22
StrcQ8VIM6 Tbc1d24-211ENSMUST00000201583 893 ntTSL 5 BASIC13.67□□□□□ -0.22
StrcQ8VIM6 Olfr1415-203ENSMUST00000204766 403 ntTSL 3 BASIC13.67□□□□□ -0.22
StrcQ8VIM6 AC122840.4-201ENSMUST00000221310 1285 ntTSL 5 BASIC13.67□□□□□ -0.22
StrcQ8VIM6 AC133499.1-201ENSMUST00000227778 1097 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
StrcQ8VIM6 CT010505.2-201ENSMUST00000227918 998 ntBASIC13.67□□□□□ -0.22
StrcQ8VIM6 Gimap7-201ENSMUST00000052503 1269 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
StrcQ8VIM6 Entpd4-201ENSMUST00000064831 1842 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
StrcQ8VIM6 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
StrcQ8VIM6 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
StrcQ8VIM6 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
StrcQ8VIM6 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
StrcQ8VIM6 Gm45428-201ENSMUST00000209619 1789 ntBASIC13.67□□□□□ -0.22
StrcQ8VIM6 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
StrcQ8VIM6 Gm4593-201ENSMUST00000205334 1555 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
StrcQ8VIM6 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
StrcQ8VIM6 Csde1-207ENSMUST00000197827 2671 ntAPPRIS P3 TSL 5 BASIC13.67□□□□□ -0.22
StrcQ8VIM6 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
StrcQ8VIM6 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
StrcQ8VIM6 Kcne3-202ENSMUST00000170954 1315 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
StrcQ8VIM6 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
StrcQ8VIM6 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
StrcQ8VIM6 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
StrcQ8VIM6 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
StrcQ8VIM6 Camk2a-205ENSMUST00000115297 499 ntTSL 2 BASIC13.67□□□□□ -0.22
StrcQ8VIM6 Gm13281-201ENSMUST00000120871 567 ntBASIC13.67□□□□□ -0.22
StrcQ8VIM6 Gm6238-201ENSMUST00000120999 465 ntBASIC13.67□□□□□ -0.22
StrcQ8VIM6 Rhox12-203ENSMUST00000183737 761 ntTSL 3 BASIC13.67□□□□□ -0.22
StrcQ8VIM6 Gm6677-201ENSMUST00000195100 441 ntBASIC13.67□□□□□ -0.22
StrcQ8VIM6 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC13.67□□□□□ -0.22
StrcQ8VIM6 Mptx1-201ENSMUST00000027816 799 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
StrcQ8VIM6 2010109A12Rik-201ENSMUST00000031330 549 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
StrcQ8VIM6 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
StrcQ8VIM6 Olfr963-201ENSMUST00000073433 936 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
StrcQ8VIM6 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
StrcQ8VIM6 Gm13608-201ENSMUST00000121807 1406 ntBASIC13.66□□□□□ -0.22
StrcQ8VIM6 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
StrcQ8VIM6 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
StrcQ8VIM6 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC13.66□□□□□ -0.22
StrcQ8VIM6 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
StrcQ8VIM6 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
StrcQ8VIM6 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
StrcQ8VIM6 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
StrcQ8VIM6 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
StrcQ8VIM6 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC13.66□□□□□ -0.22
StrcQ8VIM6 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
StrcQ8VIM6 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
StrcQ8VIM6 Gm33366-201ENSMUST00000195583 3827 ntBASIC13.66□□□□□ -0.22
StrcQ8VIM6 Nop14-201ENSMUST00000041364 2702 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
StrcQ8VIM6 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
StrcQ8VIM6 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
StrcQ8VIM6 2300003K06Rik-201ENSMUST00000105054 1265 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
StrcQ8VIM6 Tmem181c-ps-201ENSMUST00000115772 1288 ntBASIC13.66□□□□□ -0.22
StrcQ8VIM6 Gm13027-201ENSMUST00000135858 241 ntTSL 5 BASIC13.66□□□□□ -0.22
StrcQ8VIM6 Treml4-203ENSMUST00000136272 811 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
StrcQ8VIM6 Treml4-206ENSMUST00000154335 838 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
StrcQ8VIM6 Gm26725-201ENSMUST00000180652 1113 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
StrcQ8VIM6 4930422M22Rik-201ENSMUST00000191492 948 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
StrcQ8VIM6 Adh6-ps1-202ENSMUST00000196293 754 ntBASIC13.66□□□□□ -0.22
StrcQ8VIM6 Gm42599-201ENSMUST00000201308 469 ntBASIC13.66□□□□□ -0.22
StrcQ8VIM6 Gm44420-201ENSMUST00000203669 490 ntBASIC13.66□□□□□ -0.22
StrcQ8VIM6 Gm45875-201ENSMUST00000212178 781 ntTSL 3 BASIC13.66□□□□□ -0.22
StrcQ8VIM6 Gm7183-201ENSMUST00000213870 1005 ntBASIC13.66□□□□□ -0.22
StrcQ8VIM6 Colec11-201ENSMUST00000036136 1423 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
StrcQ8VIM6 Sectm1b-202ENSMUST00000081499 1222 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
StrcQ8VIM6 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
StrcQ8VIM6 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
StrcQ8VIM6 Zfp286-202ENSMUST00000108705 1979 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
StrcQ8VIM6 Micu1-212ENSMUST00000179709 1814 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
StrcQ8VIM6 Matr3-216ENSMUST00000190653 1846 ntTSL 5 BASIC13.66□□□□□ -0.22
StrcQ8VIM6 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
StrcQ8VIM6 Aldoa-202ENSMUST00000087566 1549 ntTSL 5 BASIC13.66□□□□□ -0.22
StrcQ8VIM6 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
StrcQ8VIM6 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
StrcQ8VIM6 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
StrcQ8VIM6 Cyp2a21-ps-201ENSMUST00000206638 1471 ntBASIC13.65□□□□□ -0.22
StrcQ8VIM6 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
StrcQ8VIM6 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
StrcQ8VIM6 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
StrcQ8VIM6 Cxcl11-201ENSMUST00000077820 1581 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms