Protein–RNA interactions for Protein: Q8R317

Ubqln1, Ubiquilin-1, mousemouse

Predictions only

Length 582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubqln1Q8R317 Gm19287-201ENSMUST00000203190 358 ntBASIC11.22□□□□□ -0.61
Ubqln1Q8R317 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC11.22□□□□□ -0.61
Ubqln1Q8R317 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Ubqln1Q8R317 AC093022.4-203ENSMUST00000228523 2657 ntBASIC11.22□□□□□ -0.61
Ubqln1Q8R317 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Ubqln1Q8R317 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Ubqln1Q8R317 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Ubqln1Q8R317 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Ubqln1Q8R317 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Ubqln1Q8R317 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Ubqln1Q8R317 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Ubqln1Q8R317 Ltbp2-201ENSMUST00000002073 6769 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Ubqln1Q8R317 Madd-208ENSMUST00000111370 5879 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Ubqln1Q8R317 Madd-214ENSMUST00000111381 5873 ntAPPRIS ALT2 TSL 2 BASIC11.22□□□□□ -0.61
Ubqln1Q8R317 Als2cl-201ENSMUST00000084926 5079 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Ubqln1Q8R317 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Ubqln1Q8R317 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Ubqln1Q8R317 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Ubqln1Q8R317 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Ubqln1Q8R317 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Ubqln1Q8R317 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Ubqln1Q8R317 Adgrl3-210ENSMUST00000119788 5394 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Ubqln1Q8R317 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Ubqln1Q8R317 Sec14l1-202ENSMUST00000090433 4654 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Ubqln1Q8R317 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
Ubqln1Q8R317 Tnfaip3-201ENSMUST00000019997 4422 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Ubqln1Q8R317 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Ubqln1Q8R317 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Ubqln1Q8R317 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC11.21□□□□□ -0.61
Ubqln1Q8R317 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
Ubqln1Q8R317 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Ubqln1Q8R317 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC11.21□□□□□ -0.61
Ubqln1Q8R317 Dlec1-206ENSMUST00000140326 5815 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
Ubqln1Q8R317 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Ubqln1Q8R317 Gucy2e-203ENSMUST00000108665 3645 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Ubqln1Q8R317 Aak1-201ENSMUST00000003710 7203 ntAPPRIS P3 TSL 5 BASIC11.21□□□□□ -0.61
Ubqln1Q8R317 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC11.21□□□□□ -0.61
Ubqln1Q8R317 Gm37348-201ENSMUST00000193104 1789 ntBASIC11.21□□□□□ -0.61
Ubqln1Q8R317 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Ubqln1Q8R317 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
Ubqln1Q8R317 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
Ubqln1Q8R317 Gtf2i-202ENSMUST00000082057 4375 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
Ubqln1Q8R317 Gm26794-201ENSMUST00000180810 4312 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Ubqln1Q8R317 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Ubqln1Q8R317 Gm14441-201ENSMUST00000121960 540 ntBASIC11.21□□□□□ -0.61
Ubqln1Q8R317 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Ubqln1Q8R317 Gm5616-201ENSMUST00000165252 384 ntBASIC11.21□□□□□ -0.61
Ubqln1Q8R317 Gm8741-201ENSMUST00000174736 384 ntBASIC11.21□□□□□ -0.61
Ubqln1Q8R317 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Ubqln1Q8R317 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Ubqln1Q8R317 Gm6114-201ENSMUST00000182472 968 ntBASIC11.21□□□□□ -0.61
Ubqln1Q8R317 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC11.21□□□□□ -0.61
Ubqln1Q8R317 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC11.21□□□□□ -0.61
Ubqln1Q8R317 Gm9136-201ENSMUST00000193368 454 ntBASIC11.21□□□□□ -0.61
Ubqln1Q8R317 Gm9678-201ENSMUST00000198979 1149 ntBASIC11.21□□□□□ -0.61
Ubqln1Q8R317 Gm45433-201ENSMUST00000209386 247 ntBASIC11.21□□□□□ -0.61
Ubqln1Q8R317 Gm8913-201ENSMUST00000209491 641 ntBASIC11.21□□□□□ -0.61
Ubqln1Q8R317 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Ubqln1Q8R317 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Ubqln1Q8R317 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
Ubqln1Q8R317 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Ubqln1Q8R317 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.62
Ubqln1Q8R317 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Ubqln1Q8R317 Cobl-202ENSMUST00000109650 5271 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.62
Ubqln1Q8R317 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Ubqln1Q8R317 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Ubqln1Q8R317 Tnc-201ENSMUST00000030056 6833 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Ubqln1Q8R317 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC11.21□□□□□ -0.62
Ubqln1Q8R317 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Ubqln1Q8R317 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Ubqln1Q8R317 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.62
Ubqln1Q8R317 Dach2-201ENSMUST00000067219 2520 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Ubqln1Q8R317 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Ubqln1Q8R317 Gfm1-201ENSMUST00000077271 4078 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Ubqln1Q8R317 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Ubqln1Q8R317 Myo18a-211ENSMUST00000130627 6202 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Ubqln1Q8R317 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Ubqln1Q8R317 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Ubqln1Q8R317 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Ubqln1Q8R317 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Ubqln1Q8R317 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Ubqln1Q8R317 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
Ubqln1Q8R317 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC11.2□□□□□ -0.62
Ubqln1Q8R317 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Ubqln1Q8R317 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC11.2□□□□□ -0.62
Ubqln1Q8R317 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Ubqln1Q8R317 Kbtbd12-202ENSMUST00000120933 4644 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Ubqln1Q8R317 AC160410.1-201ENSMUST00000219298 1972 ntBASIC11.2□□□□□ -0.62
Ubqln1Q8R317 Poc5-201ENSMUST00000099295 5183 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Ubqln1Q8R317 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Ubqln1Q8R317 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC11.2□□□□□ -0.62
Ubqln1Q8R317 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Ubqln1Q8R317 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Ubqln1Q8R317 Gm12997-201ENSMUST00000120207 640 ntBASIC11.2□□□□□ -0.62
Ubqln1Q8R317 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC11.2□□□□□ -0.62
Ubqln1Q8R317 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC11.2□□□□□ -0.62
Ubqln1Q8R317 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Ubqln1Q8R317 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Ubqln1Q8R317 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Ubqln1Q8R317 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC11.2□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 53 ms