Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 AC154747.3-201ENSMUST00000224471 3470 ntBASIC15.38■□□□□ 0.05
Ddx54Q8K4L0 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ddx54Q8K4L0 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ddx54Q8K4L0 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ddx54Q8K4L0 Gm23745-201ENSMUST00000104230 125 ntBASIC15.38■□□□□ 0.05
Ddx54Q8K4L0 Krt40-202ENSMUST00000107443 1080 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Ddx54Q8K4L0 Gm6158-201ENSMUST00000109467 904 ntBASIC15.38■□□□□ 0.05
Ddx54Q8K4L0 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ddx54Q8K4L0 Nhp2-202ENSMUST00000127405 1042 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ddx54Q8K4L0 Gm12000-201ENSMUST00000132007 629 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Ddx54Q8K4L0 1700085C21Rik-201ENSMUST00000187123 1082 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Ddx54Q8K4L0 Gm43506-201ENSMUST00000200675 753 ntBASIC15.38■□□□□ 0.05
Ddx54Q8K4L0 AC162938.2-202ENSMUST00000215497 722 ntTSL 5 BASIC15.38■□□□□ 0.05
Ddx54Q8K4L0 Ly86-201ENSMUST00000021860 1134 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ddx54Q8K4L0 Gm46224-201ENSMUST00000220221 1242 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Ddx54Q8K4L0 AC154759.1-201ENSMUST00000224137 1159 ntBASIC15.38■□□□□ 0.05
Ddx54Q8K4L0 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ddx54Q8K4L0 Gm5449-201ENSMUST00000081132 357 ntBASIC15.38■□□□□ 0.05
Ddx54Q8K4L0 Krtap12-1-201ENSMUST00000092370 656 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
Ddx54Q8K4L0 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Ddx54Q8K4L0 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ddx54Q8K4L0 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC15.38■□□□□ 0.05
Ddx54Q8K4L0 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Ddx54Q8K4L0 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ddx54Q8K4L0 Gm13871-202ENSMUST00000107319 1324 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ddx54Q8K4L0 Gm11757-202ENSMUST00000107321 1324 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ddx54Q8K4L0 Gm13561-201ENSMUST00000136879 1826 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Ddx54Q8K4L0 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ddx54Q8K4L0 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC15.38■□□□□ 0.05
Ddx54Q8K4L0 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ddx54Q8K4L0 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Ddx54Q8K4L0 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ddx54Q8K4L0 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ddx54Q8K4L0 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Ddx54Q8K4L0 Mpv17l-204ENSMUST00000141971 2155 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Ddx54Q8K4L0 Pex5l-203ENSMUST00000108221 1187 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Ddx54Q8K4L0 Fam107b-202ENSMUST00000115052 861 ntTSL 3 BASIC15.37■□□□□ 0.05
Ddx54Q8K4L0 Lyzl4os-202ENSMUST00000156364 726 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Ddx54Q8K4L0 Gm11269-201ENSMUST00000157011 595 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Ddx54Q8K4L0 Mir7035-201ENSMUST00000184713 82 ntBASIC15.37■□□□□ 0.05
Ddx54Q8K4L0 Gm5267-201ENSMUST00000191574 1045 ntBASIC15.37■□□□□ 0.05
Ddx54Q8K4L0 Gm18035-201ENSMUST00000211962 589 ntBASIC15.37■□□□□ 0.05
Ddx54Q8K4L0 Gm31557-202ENSMUST00000213995 722 ntTSL 5 BASIC15.37■□□□□ 0.05
Ddx54Q8K4L0 Fam228a-203ENSMUST00000220978 861 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Ddx54Q8K4L0 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Ddx54Q8K4L0 CT025689.1-201ENSMUST00000225214 283 ntBASIC15.37■□□□□ 0.05
Ddx54Q8K4L0 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ddx54Q8K4L0 Gapdhs-203ENSMUST00000182634 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ddx54Q8K4L0 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC15.37■□□□□ 0.05
Ddx54Q8K4L0 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ddx54Q8K4L0 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Ddx54Q8K4L0 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ddx54Q8K4L0 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ddx54Q8K4L0 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ddx54Q8K4L0 AC154262.2-202ENSMUST00000225158 1331 ntBASIC15.37■□□□□ 0.05
Ddx54Q8K4L0 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC15.37■□□□□ 0.05
Ddx54Q8K4L0 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Ddx54Q8K4L0 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC15.37■□□□□ 0.05
Ddx54Q8K4L0 AC107763.1-201ENSMUST00000226082 1365 ntBASIC15.36■□□□□ 0.05
Ddx54Q8K4L0 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ddx54Q8K4L0 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Ddx54Q8K4L0 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ddx54Q8K4L0 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ddx54Q8K4L0 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC15.36■□□□□ 0.05
Ddx54Q8K4L0 Tia1-211ENSMUST00000130967 1445 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Ddx54Q8K4L0 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Ddx54Q8K4L0 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ddx54Q8K4L0 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ddx54Q8K4L0 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC15.36■□□□□ 0.05
Ddx54Q8K4L0 Art5-203ENSMUST00000106935 495 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Ddx54Q8K4L0 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC15.36■□□□□ 0.05
Ddx54Q8K4L0 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC15.36■□□□□ 0.05
Ddx54Q8K4L0 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Ddx54Q8K4L0 Gm13802-201ENSMUST00000150159 663 ntTSL 3 BASIC15.36■□□□□ 0.05
Ddx54Q8K4L0 Gm24078-201ENSMUST00000158184 103 ntBASIC15.36■□□□□ 0.05
Ddx54Q8K4L0 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Ddx54Q8K4L0 Gm17190-202ENSMUST00000185178 1074 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
Ddx54Q8K4L0 Gm2345-201ENSMUST00000193451 589 ntBASIC15.36■□□□□ 0.05
Ddx54Q8K4L0 Gm5982-201ENSMUST00000196234 512 ntBASIC15.36■□□□□ 0.05
Ddx54Q8K4L0 C230062I16Rik-203ENSMUST00000208015 648 ntTSL 3 BASIC15.36■□□□□ 0.05
Ddx54Q8K4L0 Gstz1-203ENSMUST00000220574 971 ntTSL 2 BASIC15.36■□□□□ 0.05
Ddx54Q8K4L0 CT030166.5-201ENSMUST00000222249 420 ntBASIC15.36■□□□□ 0.05
Ddx54Q8K4L0 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ddx54Q8K4L0 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ddx54Q8K4L0 Hsd3b3-204ENSMUST00000107019 1533 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Ddx54Q8K4L0 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ddx54Q8K4L0 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ddx54Q8K4L0 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC15.36■□□□□ 0.05
Ddx54Q8K4L0 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ddx54Q8K4L0 Rnf17-202ENSMUST00000223627 2077 ntBASIC15.36■□□□□ 0.05
Ddx54Q8K4L0 Gm42432-201ENSMUST00000197902 1617 ntBASIC15.35■□□□□ 0.05
Ddx54Q8K4L0 Cd2bp2-202ENSMUST00000166791 3284 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ddx54Q8K4L0 Gm1840-201ENSMUST00000051687 1432 ntBASIC15.35■□□□□ 0.05
Ddx54Q8K4L0 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ddx54Q8K4L0 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC15.35■□□□□ 0.05
Ddx54Q8K4L0 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC15.35■□□□□ 0.05
Ddx54Q8K4L0 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Ddx54Q8K4L0 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ddx54Q8K4L0 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ddx54Q8K4L0 Gm23769-201ENSMUST00000104441 121 ntBASIC15.35■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 52.2 ms