Protein–RNA interactions for Protein: Q8CDV4

Trim52, Tripartite motif-containing 52, mousemouse

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim52Q8CDV4 Gm19046-201ENSMUST00000221263 1298 ntBASIC14.49□□□□□ -0.09
Trim52Q8CDV4 1600002K03Rik-201ENSMUST00000041882 678 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trim52Q8CDV4 Olfr1163-201ENSMUST00000099835 1043 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Trim52Q8CDV4 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trim52Q8CDV4 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trim52Q8CDV4 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Trim52Q8CDV4 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC14.49□□□□□ -0.09
Trim52Q8CDV4 Tmprss4-201ENSMUST00000034599 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trim52Q8CDV4 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trim52Q8CDV4 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trim52Q8CDV4 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trim52Q8CDV4 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trim52Q8CDV4 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Trim52Q8CDV4 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trim52Q8CDV4 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trim52Q8CDV4 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC14.48□□□□□ -0.09
Trim52Q8CDV4 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trim52Q8CDV4 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Trim52Q8CDV4 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
Trim52Q8CDV4 Camk2b-207ENSMUST00000101586 1590 ntTSL 5 BASIC14.48□□□□□ -0.09
Trim52Q8CDV4 Nudt6-207ENSMUST00000141438 899 ntTSL 2 BASIC14.48□□□□□ -0.09
Trim52Q8CDV4 Olfr755-ps1-201ENSMUST00000173568 910 ntBASIC14.48□□□□□ -0.09
Trim52Q8CDV4 Gm43552-201ENSMUST00000196121 365 ntAPPRIS P1 TSL 3 BASIC14.48□□□□□ -0.09
Trim52Q8CDV4 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC14.48□□□□□ -0.09
Trim52Q8CDV4 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC14.48□□□□□ -0.09
Trim52Q8CDV4 Gm44759-201ENSMUST00000206057 430 ntTSL 3 BASIC14.48□□□□□ -0.09
Trim52Q8CDV4 AC120394.2-201ENSMUST00000213905 702 ntTSL 5 BASIC14.48□□□□□ -0.09
Trim52Q8CDV4 Mgp-201ENSMUST00000032342 617 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trim52Q8CDV4 Cysrt1-201ENSMUST00000043379 873 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trim52Q8CDV4 Gm10135-201ENSMUST00000043711 252 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Trim52Q8CDV4 Atp5h-201ENSMUST00000043931 625 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trim52Q8CDV4 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trim52Q8CDV4 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trim52Q8CDV4 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trim52Q8CDV4 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC14.48□□□□□ -0.09
Trim52Q8CDV4 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trim52Q8CDV4 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trim52Q8CDV4 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trim52Q8CDV4 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trim52Q8CDV4 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trim52Q8CDV4 Gm20757-201ENSMUST00000182870 1604 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Trim52Q8CDV4 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trim52Q8CDV4 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trim52Q8CDV4 Sparc-207ENSMUST00000213866 1366 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Trim52Q8CDV4 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trim52Q8CDV4 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trim52Q8CDV4 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trim52Q8CDV4 Gm10750-201ENSMUST00000099266 1506 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Trim52Q8CDV4 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trim52Q8CDV4 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trim52Q8CDV4 AU015791-201ENSMUST00000223443 1457 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trim52Q8CDV4 Gm13422-201ENSMUST00000118834 504 ntBASIC14.47□□□□□ -0.09
Trim52Q8CDV4 Selenot-ps-201ENSMUST00000119098 593 ntBASIC14.47□□□□□ -0.09
Trim52Q8CDV4 Gm12030-201ENSMUST00000121917 223 ntBASIC14.47□□□□□ -0.09
Trim52Q8CDV4 Dnmt3l-203ENSMUST00000131825 1113 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trim52Q8CDV4 Dnmt3l-206ENSMUST00000139539 1279 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trim52Q8CDV4 Gm13703-201ENSMUST00000150705 449 ntTSL 2 BASIC14.47□□□□□ -0.09
Trim52Q8CDV4 Gm25554-201ENSMUST00000158075 113 ntBASIC14.47□□□□□ -0.09
Trim52Q8CDV4 Fhit-204ENSMUST00000161302 860 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trim52Q8CDV4 Gm3671-201ENSMUST00000182463 1007 ntBASIC14.47□□□□□ -0.09
Trim52Q8CDV4 Rbp2-202ENSMUST00000187905 611 ntAPPRIS P1 TSL 3 BASIC14.47□□□□□ -0.09
Trim52Q8CDV4 Gm35960-201ENSMUST00000202712 767 ntBASIC14.47□□□□□ -0.09
Trim52Q8CDV4 Gm39288-201ENSMUST00000210554 446 ntBASIC14.47□□□□□ -0.09
Trim52Q8CDV4 Gm45338-204ENSMUST00000210658 1105 ntTSL 5 BASIC14.47□□□□□ -0.09
Trim52Q8CDV4 Gm45717-201ENSMUST00000211129 495 ntAPPRIS P1 TSL 3 BASIC14.47□□□□□ -0.09
Trim52Q8CDV4 Gm45410-201ENSMUST00000211331 1093 ntBASIC14.47□□□□□ -0.09
Trim52Q8CDV4 Gm4065-202ENSMUST00000218911 986 ntTSL 3 BASIC14.47□□□□□ -0.09
Trim52Q8CDV4 CT009536.2-201ENSMUST00000225370 665 ntBASIC14.47□□□□□ -0.09
Trim52Q8CDV4 Eny2-204ENSMUST00000226827 558 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Trim52Q8CDV4 Nmi-201ENSMUST00000028314 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trim52Q8CDV4 Uba52-201ENSMUST00000081940 541 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
Trim52Q8CDV4 Gm25517-201ENSMUST00000083865 134 ntBASIC14.47□□□□□ -0.09
Trim52Q8CDV4 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trim52Q8CDV4 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trim52Q8CDV4 Clcc1-202ENSMUST00000106609 2043 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trim52Q8CDV4 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trim52Q8CDV4 Tcim-201ENSMUST00000052622 1805 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Trim52Q8CDV4 AC157950.1-201ENSMUST00000217561 2168 ntBASIC14.47□□□□□ -0.09
Trim52Q8CDV4 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Trim52Q8CDV4 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trim52Q8CDV4 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trim52Q8CDV4 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trim52Q8CDV4 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC14.47□□□□□ -0.09
Trim52Q8CDV4 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trim52Q8CDV4 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trim52Q8CDV4 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trim52Q8CDV4 Spag6-201ENSMUST00000095132 2458 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trim52Q8CDV4 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trim52Q8CDV4 AC130823.1-201ENSMUST00000228929 1549 ntBASIC14.46□□□□□ -0.09
Trim52Q8CDV4 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trim52Q8CDV4 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC14.46□□□□□ -0.09
Trim52Q8CDV4 Gm9947-201ENSMUST00000067599 2920 ntBASIC14.46□□□□□ -0.09
Trim52Q8CDV4 Clec4a3-201ENSMUST00000088468 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trim52Q8CDV4 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trim52Q8CDV4 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trim52Q8CDV4 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC14.46□□□□□ -0.09
Trim52Q8CDV4 Gm12248-202ENSMUST00000218429 1462 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Trim52Q8CDV4 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC14.46□□□□□ -0.09
Trim52Q8CDV4 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trim52Q8CDV4 Gm25148-201ENSMUST00000104611 123 ntBASIC14.46□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 50.6 ms