Protein–RNA interactions for Protein: Q8CC84

Lysmd4, LysM and putative peptidoglycan-binding domain-containing protein 4, mousemouse

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd4Q8CC84 Rgs12-203ENSMUST00000114280 2777 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Lysmd4Q8CC84 C2cd5-213ENSMUST00000204655 3526 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
Lysmd4Q8CC84 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Lysmd4Q8CC84 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Lysmd4Q8CC84 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC10.56□□□□□ -0.72
Lysmd4Q8CC84 Tmcc1-208ENSMUST00000173140 1910 ntTSL 5 BASIC10.56□□□□□ -0.72
Lysmd4Q8CC84 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Lysmd4Q8CC84 Frg2f1-201ENSMUST00000079611 1909 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Lysmd4Q8CC84 Gm38115-201ENSMUST00000194317 2413 ntTSL 5 BASIC10.56□□□□□ -0.72
Lysmd4Q8CC84 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Lysmd4Q8CC84 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Lysmd4Q8CC84 AC114008.2-201ENSMUST00000227699 1347 ntBASIC10.56□□□□□ -0.72
Lysmd4Q8CC84 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Lysmd4Q8CC84 Kbtbd12-202ENSMUST00000120933 4644 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
Lysmd4Q8CC84 Coq8a-201ENSMUST00000027766 4026 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Lysmd4Q8CC84 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Lysmd4Q8CC84 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Lysmd4Q8CC84 Bicra-204ENSMUST00000210781 5975 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Lysmd4Q8CC84 Nfasc-203ENSMUST00000163770 3903 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
Lysmd4Q8CC84 Plg-201ENSMUST00000014578 2755 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Lysmd4Q8CC84 Tas1r2-202ENSMUST00000166773 2524 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Lysmd4Q8CC84 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC10.55□□□□□ -0.72
Lysmd4Q8CC84 Tmem134-216ENSMUST00000171743 3701 ntTSL 5 BASIC10.55□□□□□ -0.72
Lysmd4Q8CC84 Gnas-203ENSMUST00000087876 3719 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Lysmd4Q8CC84 Tfr2-207ENSMUST00000198866 3072 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Lysmd4Q8CC84 Herc4-201ENSMUST00000020258 3898 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Lysmd4Q8CC84 Tns1-209ENSMUST00000187691 2813 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Lysmd4Q8CC84 Pou1f1-201ENSMUST00000004964 1773 ntTSL 5 BASIC10.55□□□□□ -0.72
Lysmd4Q8CC84 Plekha6-203ENSMUST00000186917 4820 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Lysmd4Q8CC84 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Lysmd4Q8CC84 Dph6-203ENSMUST00000102542 2734 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Lysmd4Q8CC84 Cxcl12-203ENSMUST00000112871 3132 ntAPPRIS P4 TSL 1 (best) BASIC10.55□□□□□ -0.72
Lysmd4Q8CC84 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC10.55□□□□□ -0.72
Lysmd4Q8CC84 Sgk1-201ENSMUST00000020145 2456 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Lysmd4Q8CC84 Rxfp2-206ENSMUST00000201612 2470 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Lysmd4Q8CC84 Aldoart2-201ENSMUST00000080123 1658 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
Lysmd4Q8CC84 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
Lysmd4Q8CC84 Igkv3-12-201ENSMUST00000103396 359 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
Lysmd4Q8CC84 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
Lysmd4Q8CC84 Gm11424-201ENSMUST00000121929 829 ntBASIC10.55□□□□□ -0.72
Lysmd4Q8CC84 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC10.55□□□□□ -0.72
Lysmd4Q8CC84 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
Lysmd4Q8CC84 Gm8835-201ENSMUST00000173096 1169 ntBASIC10.55□□□□□ -0.72
Lysmd4Q8CC84 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Lysmd4Q8CC84 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC10.55□□□□□ -0.72
Lysmd4Q8CC84 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC10.55□□□□□ -0.72
Lysmd4Q8CC84 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC10.55□□□□□ -0.72
Lysmd4Q8CC84 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC10.55□□□□□ -0.72
Lysmd4Q8CC84 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Lysmd4Q8CC84 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Lysmd4Q8CC84 Cysrt1-201ENSMUST00000043379 873 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Lysmd4Q8CC84 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
Lysmd4Q8CC84 Map4-206ENSMUST00000169851 3446 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Lysmd4Q8CC84 Flad1-202ENSMUST00000107426 2238 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Lysmd4Q8CC84 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Lysmd4Q8CC84 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
Lysmd4Q8CC84 Sh2d2a-202ENSMUST00000107581 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Lysmd4Q8CC84 Sord-201ENSMUST00000110551 2352 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Lysmd4Q8CC84 Nxpe5-204ENSMUST00000161047 2379 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Lysmd4Q8CC84 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC10.55□□□□□ -0.72
Lysmd4Q8CC84 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC10.55□□□□□ -0.72
Lysmd4Q8CC84 Dip2c-201ENSMUST00000166299 4822 ntTSL 5 BASIC10.55□□□□□ -0.72
Lysmd4Q8CC84 Rpap2-204ENSMUST00000112654 2914 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Lysmd4Q8CC84 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC10.55□□□□□ -0.72
Lysmd4Q8CC84 D630008O14Rik-201ENSMUST00000144260 1568 ntTSL 2 BASIC10.55□□□□□ -0.72
Lysmd4Q8CC84 Plek2-201ENSMUST00000021544 1583 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Lysmd4Q8CC84 Prex1-202ENSMUST00000099080 5818 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Lysmd4Q8CC84 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
Lysmd4Q8CC84 Tmprss4-201ENSMUST00000034599 2284 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Lysmd4Q8CC84 Gm26811-201ENSMUST00000181258 5485 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Lysmd4Q8CC84 Gm5740-201ENSMUST00000211003 1857 ntBASIC10.55□□□□□ -0.72
Lysmd4Q8CC84 Mknk1-202ENSMUST00000106513 2552 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Lysmd4Q8CC84 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Lysmd4Q8CC84 Gem-202ENSMUST00000108304 2006 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Lysmd4Q8CC84 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Lysmd4Q8CC84 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC10.55□□□□□ -0.72
Lysmd4Q8CC84 Tmem109-201ENSMUST00000038128 2188 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Lysmd4Q8CC84 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Lysmd4Q8CC84 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Lysmd4Q8CC84 Qsox1-201ENSMUST00000035325 3348 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
Lysmd4Q8CC84 AC154404.1-201ENSMUST00000223601 2077 ntBASIC10.54□□□□□ -0.72
Lysmd4Q8CC84 Nefm-202ENSMUST00000111089 3680 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Lysmd4Q8CC84 Nmnat1-203ENSMUST00000119921 2657 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Lysmd4Q8CC84 Pck1-201ENSMUST00000029017 2661 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Lysmd4Q8CC84 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
Lysmd4Q8CC84 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Lysmd4Q8CC84 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC10.54□□□□□ -0.72
Lysmd4Q8CC84 Chil1-207ENSMUST00000153856 1839 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Lysmd4Q8CC84 Ift46-201ENSMUST00000002099 4169 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Lysmd4Q8CC84 Trpc6-203ENSMUST00000217462 3168 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Lysmd4Q8CC84 Uspl1-201ENSMUST00000050472 3757 ntAPPRIS P4 TSL 1 (best) BASIC10.54□□□□□ -0.72
Lysmd4Q8CC84 Slc9a1-201ENSMUST00000030669 4676 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Lysmd4Q8CC84 Tctn1-201ENSMUST00000111738 5717 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Lysmd4Q8CC84 Bod1l-204ENSMUST00000202908 10399 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
Lysmd4Q8CC84 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC10.54□□□□□ -0.72
Lysmd4Q8CC84 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC10.54□□□□□ -0.72
Lysmd4Q8CC84 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Lysmd4Q8CC84 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Lysmd4Q8CC84 Gm13449-201ENSMUST00000153559 1231 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Lysmd4Q8CC84 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 83.6 ms