Protein–RNA interactions for Protein: Q8BJF9

Chmp2b, Charged multivesicular body protein 2b, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2bQ8BJF9 Scaf4-202ENSMUST00000163419 4169 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Chmp2bQ8BJF9 Gm8146-201ENSMUST00000192106 1847 ntBASIC12.09□□□□□ -0.47
Chmp2bQ8BJF9 Clasp1-216ENSMUST00000189738 5373 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Chmp2bQ8BJF9 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Chmp2bQ8BJF9 Stxbp5l-204ENSMUST00000114781 3544 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Chmp2bQ8BJF9 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC12.09□□□□□ -0.47
Chmp2bQ8BJF9 Abi1-209ENSMUST00000140164 3403 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Chmp2bQ8BJF9 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Chmp2bQ8BJF9 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Chmp2bQ8BJF9 Gm5419-201ENSMUST00000119301 527 ntBASIC12.09□□□□□ -0.47
Chmp2bQ8BJF9 Snora78-201ENSMUST00000158630 128 ntBASIC12.09□□□□□ -0.47
Chmp2bQ8BJF9 Gm26778-201ENSMUST00000181443 3805 ntTSL 5 BASIC12.09□□□□□ -0.47
Chmp2bQ8BJF9 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC12.09□□□□□ -0.47
Chmp2bQ8BJF9 Camsap3-209ENSMUST00000207970 3817 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Chmp2bQ8BJF9 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC12.09□□□□□ -0.47
Chmp2bQ8BJF9 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC12.09□□□□□ -0.47
Chmp2bQ8BJF9 Rin2-201ENSMUST00000094480 4657 ntAPPRIS P2 TSL 5 BASIC12.09□□□□□ -0.47
Chmp2bQ8BJF9 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Chmp2bQ8BJF9 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC12.09□□□□□ -0.47
Chmp2bQ8BJF9 Wdr82-201ENSMUST00000020490 3747 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Chmp2bQ8BJF9 Gm37931-201ENSMUST00000194686 2866 ntBASIC12.09□□□□□ -0.47
Chmp2bQ8BJF9 Miga2-201ENSMUST00000077977 3381 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Chmp2bQ8BJF9 9230105E05Rik-201ENSMUST00000161291 2250 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Chmp2bQ8BJF9 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Chmp2bQ8BJF9 Elavl2-204ENSMUST00000107110 3671 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Chmp2bQ8BJF9 Pabpc1-201ENSMUST00000001809 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Chmp2bQ8BJF9 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Chmp2bQ8BJF9 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Chmp2bQ8BJF9 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
Chmp2bQ8BJF9 Gm38187-201ENSMUST00000195609 4709 ntBASIC12.09□□□□□ -0.47
Chmp2bQ8BJF9 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC12.09□□□□□ -0.47
Chmp2bQ8BJF9 Rasgrp4-208ENSMUST00000161522 3242 ntTSL 5 BASIC12.09□□□□□ -0.47
Chmp2bQ8BJF9 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Chmp2bQ8BJF9 Slc30a8-201ENSMUST00000037240 1971 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Chmp2bQ8BJF9 Uspl1-201ENSMUST00000050472 3757 ntAPPRIS P4 TSL 1 (best) BASIC12.08□□□□□ -0.47
Chmp2bQ8BJF9 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.47
Chmp2bQ8BJF9 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Chmp2bQ8BJF9 Alox12-201ENSMUST00000000329 3001 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Chmp2bQ8BJF9 Gm21319-201ENSMUST00000164517 1863 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Chmp2bQ8BJF9 Gper1-201ENSMUST00000066211 2537 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Chmp2bQ8BJF9 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Chmp2bQ8BJF9 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Chmp2bQ8BJF9 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Chmp2bQ8BJF9 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Chmp2bQ8BJF9 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Chmp2bQ8BJF9 Gm5187-201ENSMUST00000117317 991 ntBASIC12.08□□□□□ -0.48
Chmp2bQ8BJF9 Gm14441-201ENSMUST00000121960 540 ntBASIC12.08□□□□□ -0.48
Chmp2bQ8BJF9 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC12.08□□□□□ -0.48
Chmp2bQ8BJF9 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Chmp2bQ8BJF9 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC12.08□□□□□ -0.48
Chmp2bQ8BJF9 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC12.08□□□□□ -0.48
Chmp2bQ8BJF9 Gm45880-201ENSMUST00000213041 853 ntBASIC12.08□□□□□ -0.48
Chmp2bQ8BJF9 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Chmp2bQ8BJF9 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Chmp2bQ8BJF9 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Chmp2bQ8BJF9 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC12.08□□□□□ -0.48
Chmp2bQ8BJF9 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC12.08□□□□□ -0.48
Chmp2bQ8BJF9 Cd2bp2-207ENSMUST00000206026 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Chmp2bQ8BJF9 D130017N08Rik-203ENSMUST00000196629 2265 ntBASIC12.08□□□□□ -0.48
Chmp2bQ8BJF9 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Chmp2bQ8BJF9 Phldb2-201ENSMUST00000036355 5483 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Chmp2bQ8BJF9 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC12.08□□□□□ -0.48
Chmp2bQ8BJF9 Gpat3-202ENSMUST00000092990 3035 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Chmp2bQ8BJF9 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Chmp2bQ8BJF9 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Chmp2bQ8BJF9 Sorcs1-202ENSMUST00000111756 3617 ntAPPRIS ALT1 TSL 5 BASIC12.07□□□□□ -0.48
Chmp2bQ8BJF9 Sorcs1-207ENSMUST00000211008 3617 ntAPPRIS ALT1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Chmp2bQ8BJF9 Gm33677-201ENSMUST00000220074 2765 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Chmp2bQ8BJF9 Fbln2-201ENSMUST00000041544 4786 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Chmp2bQ8BJF9 Mmel1-202ENSMUST00000080559 2926 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Chmp2bQ8BJF9 Adcy8-201ENSMUST00000023007 6990 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Chmp2bQ8BJF9 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Chmp2bQ8BJF9 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC12.07□□□□□ -0.48
Chmp2bQ8BJF9 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Chmp2bQ8BJF9 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Chmp2bQ8BJF9 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Chmp2bQ8BJF9 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC12.07□□□□□ -0.48
Chmp2bQ8BJF9 Gm3716-202ENSMUST00000198582 2879 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Chmp2bQ8BJF9 Gm14698-201ENSMUST00000096420 4226 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Chmp2bQ8BJF9 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Chmp2bQ8BJF9 Mospd2-203ENSMUST00000112248 2487 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Chmp2bQ8BJF9 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC12.07□□□□□ -0.48
Chmp2bQ8BJF9 Odf2-209ENSMUST00000113764 2450 ntAPPRIS P3 TSL 5 BASIC12.07□□□□□ -0.48
Chmp2bQ8BJF9 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Chmp2bQ8BJF9 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC12.07□□□□□ -0.48
Chmp2bQ8BJF9 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Chmp2bQ8BJF9 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Chmp2bQ8BJF9 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Chmp2bQ8BJF9 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Chmp2bQ8BJF9 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC12.07□□□□□ -0.48
Chmp2bQ8BJF9 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC12.07□□□□□ -0.48
Chmp2bQ8BJF9 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC12.07□□□□□ -0.48
Chmp2bQ8BJF9 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Chmp2bQ8BJF9 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC12.07□□□□□ -0.48
Chmp2bQ8BJF9 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC12.07□□□□□ -0.48
Chmp2bQ8BJF9 Morn2-202ENSMUST00000227729 656 ntBASIC12.07□□□□□ -0.48
Chmp2bQ8BJF9 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Chmp2bQ8BJF9 Btbd9-202ENSMUST00000168787 6857 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Chmp2bQ8BJF9 Rab14-202ENSMUST00000113025 4346 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Chmp2bQ8BJF9 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms