Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC11.62□□□□□ -0.55
Pcdh19Q80TF3 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC11.62□□□□□ -0.55
Pcdh19Q80TF3 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pcdh19Q80TF3 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Pcdh19Q80TF3 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC11.62□□□□□ -0.55
Pcdh19Q80TF3 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pcdh19Q80TF3 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pcdh19Q80TF3 Pcdhga3-201ENSMUST00000073447 4720 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pcdh19Q80TF3 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pcdh19Q80TF3 Rbm47-209ENSMUST00000201544 5211 ntAPPRIS P3 TSL 5 BASIC11.62□□□□□ -0.55
Pcdh19Q80TF3 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pcdh19Q80TF3 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pcdh19Q80TF3 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Pcdh19Q80TF3 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pcdh19Q80TF3 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Pcdh19Q80TF3 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC11.61□□□□□ -0.55
Pcdh19Q80TF3 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pcdh19Q80TF3 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pcdh19Q80TF3 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Pcdh19Q80TF3 Numa1-201ENSMUST00000084852 7180 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pcdh19Q80TF3 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pcdh19Q80TF3 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Pcdh19Q80TF3 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pcdh19Q80TF3 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC11.61□□□□□ -0.55
Pcdh19Q80TF3 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Pcdh19Q80TF3 S100a16-206ENSMUST00000107335 926 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Pcdh19Q80TF3 Tsc22d4-204ENSMUST00000110983 1043 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Pcdh19Q80TF3 Gsg1-202ENSMUST00000111909 1087 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Pcdh19Q80TF3 Gm12176-201ENSMUST00000121420 875 ntBASIC11.61□□□□□ -0.55
Pcdh19Q80TF3 Odf4-202ENSMUST00000125134 646 ntTSL 3 BASIC11.61□□□□□ -0.55
Pcdh19Q80TF3 Tspo2-205ENSMUST00000162481 473 ntTSL 5 BASIC11.61□□□□□ -0.55
Pcdh19Q80TF3 Gm17168-201ENSMUST00000169146 345 ntTSL 5 BASIC11.61□□□□□ -0.55
Pcdh19Q80TF3 Gm19459-201ENSMUST00000176240 835 ntBASIC11.61□□□□□ -0.55
Pcdh19Q80TF3 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Pcdh19Q80TF3 4930430O22Rik-202ENSMUST00000202548 579 ntBASIC11.61□□□□□ -0.55
Pcdh19Q80TF3 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC11.61□□□□□ -0.55
Pcdh19Q80TF3 C230062I16Rik-204ENSMUST00000208342 643 ntTSL 3 BASIC11.61□□□□□ -0.55
Pcdh19Q80TF3 CT009713.8-202ENSMUST00000224732 385 ntBASIC11.61□□□□□ -0.55
Pcdh19Q80TF3 Ltbp2-201ENSMUST00000002073 6769 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Pcdh19Q80TF3 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pcdh19Q80TF3 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Pcdh19Q80TF3 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pcdh19Q80TF3 Psd4-201ENSMUST00000056641 4748 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pcdh19Q80TF3 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pcdh19Q80TF3 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pcdh19Q80TF3 Gm44152-201ENSMUST00000205007 1691 ntBASIC11.61□□□□□ -0.55
Pcdh19Q80TF3 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC11.61□□□□□ -0.55
Pcdh19Q80TF3 Dnmt3a-203ENSMUST00000111186 5424 ntAPPRIS P3 TSL 5 BASIC11.61□□□□□ -0.55
Pcdh19Q80TF3 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Pcdh19Q80TF3 Dcaf8-201ENSMUST00000074144 4656 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pcdh19Q80TF3 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pcdh19Q80TF3 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pcdh19Q80TF3 Sptbn2-201ENSMUST00000008991 8251 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pcdh19Q80TF3 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pcdh19Q80TF3 Grm1-201ENSMUST00000044306 6930 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pcdh19Q80TF3 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Pcdh19Q80TF3 Cic-212ENSMUST00000169266 8221 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pcdh19Q80TF3 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pcdh19Q80TF3 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pcdh19Q80TF3 Gm44414-201ENSMUST00000203660 2109 ntBASIC11.6□□□□□ -0.55
Pcdh19Q80TF3 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pcdh19Q80TF3 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC11.6□□□□□ -0.55
Pcdh19Q80TF3 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Pcdh19Q80TF3 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pcdh19Q80TF3 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pcdh19Q80TF3 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pcdh19Q80TF3 Slc6a9-210ENSMUST00000169885 1876 ntTSL 5 BASIC11.6□□□□□ -0.55
Pcdh19Q80TF3 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pcdh19Q80TF3 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
Pcdh19Q80TF3 Map2k7-205ENSMUST00000110996 1188 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Pcdh19Q80TF3 Mup-ps26-201ENSMUST00000121751 202 ntBASIC11.6□□□□□ -0.55
Pcdh19Q80TF3 2410003L11Rik-202ENSMUST00000145262 642 ntTSL 3 BASIC11.6□□□□□ -0.55
Pcdh19Q80TF3 Gm14662-201ENSMUST00000145552 734 ntTSL 3 BASIC11.6□□□□□ -0.55
Pcdh19Q80TF3 4931406G06Rik-201ENSMUST00000147848 1252 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Pcdh19Q80TF3 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Pcdh19Q80TF3 Erh-202ENSMUST00000166931 506 ntTSL 2 BASIC11.6□□□□□ -0.55
Pcdh19Q80TF3 Gm24514-201ENSMUST00000174961 285 ntBASIC11.6□□□□□ -0.55
Pcdh19Q80TF3 Gm26952-201ENSMUST00000181996 409 ntTSL 3 BASIC11.6□□□□□ -0.55
Pcdh19Q80TF3 Stpg4-202ENSMUST00000186211 591 ntAPPRIS ALT2 TSL 2 BASIC11.6□□□□□ -0.55
Pcdh19Q80TF3 Gm37835-201ENSMUST00000193305 361 ntBASIC11.6□□□□□ -0.55
Pcdh19Q80TF3 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC11.6□□□□□ -0.55
Pcdh19Q80TF3 Ngdn-201ENSMUST00000022815 1200 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pcdh19Q80TF3 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Pcdh19Q80TF3 Olfr293-201ENSMUST00000081474 1011 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Pcdh19Q80TF3 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Pcdh19Q80TF3 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pcdh19Q80TF3 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pcdh19Q80TF3 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pcdh19Q80TF3 Gm8522-201ENSMUST00000118416 1929 ntBASIC11.6□□□□□ -0.55
Pcdh19Q80TF3 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Pcdh19Q80TF3 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pcdh19Q80TF3 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Pcdh19Q80TF3 Gm2238-201ENSMUST00000192074 3669 ntBASIC11.59□□□□□ -0.55
Pcdh19Q80TF3 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Pcdh19Q80TF3 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pcdh19Q80TF3 Mecom-202ENSMUST00000108270 5692 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Pcdh19Q80TF3 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pcdh19Q80TF3 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Pcdh19Q80TF3 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC11.59□□□□□ -0.55
Pcdh19Q80TF3 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms