Protein–RNA interactions for Protein: Q64739

Col11a2, Collagen alpha-2(XI) chain, mousemouse

Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a2Q64739 Gm7104-201ENSMUST00000179741 2532 ntBASIC13.98□□□□□ -0.17
Col11a2Q64739 Pfn1-202ENSMUST00000108549 608 ntTSL 2 BASIC13.98□□□□□ -0.17
Col11a2Q64739 Gm11700-201ENSMUST00000119409 403 ntBASIC13.98□□□□□ -0.17
Col11a2Q64739 Gm13954-201ENSMUST00000123441 543 ntTSL 3 BASIC13.98□□□□□ -0.17
Col11a2Q64739 9230111E07Rik-201ENSMUST00000124850 811 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Col11a2Q64739 Milr1-206ENSMUST00000182896 918 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Col11a2Q64739 Milr1-207ENSMUST00000182908 811 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Col11a2Q64739 Gm37723-201ENSMUST00000194480 565 ntBASIC13.98□□□□□ -0.17
Col11a2Q64739 Gm43244-201ENSMUST00000196994 1285 ntBASIC13.98□□□□□ -0.17
Col11a2Q64739 Gm39091-201ENSMUST00000206189 553 ntTSL 2 BASIC13.98□□□□□ -0.17
Col11a2Q64739 Gm6518-201ENSMUST00000208450 342 ntBASIC13.98□□□□□ -0.17
Col11a2Q64739 Haao-201ENSMUST00000000687 1222 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Col11a2Q64739 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Col11a2Q64739 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Col11a2Q64739 Dedd-202ENSMUST00000097467 1606 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Col11a2Q64739 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Col11a2Q64739 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Col11a2Q64739 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Col11a2Q64739 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Col11a2Q64739 Gm38192-201ENSMUST00000194364 1847 ntBASIC13.97□□□□□ -0.17
Col11a2Q64739 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Col11a2Q64739 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC13.97□□□□□ -0.17
Col11a2Q64739 Ntm-201ENSMUST00000075069 3022 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Col11a2Q64739 Impdh2-ps-201ENSMUST00000120826 1545 ntBASIC13.97□□□□□ -0.17
Col11a2Q64739 Gm33831-201ENSMUST00000211696 1542 ntTSL 5 BASIC13.97□□□□□ -0.17
Col11a2Q64739 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC13.97□□□□□ -0.17
Col11a2Q64739 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC13.97□□□□□ -0.17
Col11a2Q64739 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Col11a2Q64739 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Col11a2Q64739 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Col11a2Q64739 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Col11a2Q64739 Bcl2l11-204ENSMUST00000103211 672 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
Col11a2Q64739 Gm23595-201ENSMUST00000104306 130 ntBASIC13.97□□□□□ -0.17
Col11a2Q64739 Auts2-216ENSMUST00000185450 144 ntTSL 5 BASIC13.97□□□□□ -0.17
Col11a2Q64739 Gm6794-201ENSMUST00000203829 457 ntBASIC13.97□□□□□ -0.17
Col11a2Q64739 H2-Aa-201ENSMUST00000040655 1132 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Col11a2Q64739 Defb29-201ENSMUST00000060598 462 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Col11a2Q64739 Olfr700-201ENSMUST00000079936 951 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Col11a2Q64739 Gm6478-201ENSMUST00000099450 742 ntBASIC13.97□□□□□ -0.17
Col11a2Q64739 Gm43773-201ENSMUST00000198548 2162 ntBASIC13.97□□□□□ -0.17
Col11a2Q64739 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Col11a2Q64739 Tcn2-203ENSMUST00000109989 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Col11a2Q64739 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
Col11a2Q64739 Ankrd34c-202ENSMUST00000185470 2475 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Col11a2Q64739 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Col11a2Q64739 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Col11a2Q64739 Gm37122-201ENSMUST00000195313 1567 ntBASIC13.97□□□□□ -0.17
Col11a2Q64739 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Col11a2Q64739 Gm17745-201ENSMUST00000212186 1692 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Col11a2Q64739 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Col11a2Q64739 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Col11a2Q64739 Gm31138-201ENSMUST00000212296 1705 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Col11a2Q64739 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC13.96□□□□□ -0.17
Col11a2Q64739 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Col11a2Q64739 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Col11a2Q64739 Ifna9-201ENSMUST00000102807 573 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Col11a2Q64739 Gm23604-201ENSMUST00000104311 132 ntBASIC13.96□□□□□ -0.17
Col11a2Q64739 Atp5g3-202ENSMUST00000111996 723 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
Col11a2Q64739 Tprkb-204ENSMUST00000113752 749 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Col11a2Q64739 Gm16209-201ENSMUST00000118457 627 ntBASIC13.96□□□□□ -0.17
Col11a2Q64739 Gm10171-201ENSMUST00000126220 628 ntBASIC13.96□□□□□ -0.17
Col11a2Q64739 Gm16305-201ENSMUST00000140747 556 ntBASIC13.96□□□□□ -0.17
Col11a2Q64739 C330021F23Rik-204ENSMUST00000151633 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Col11a2Q64739 Slc1a3-208ENSMUST00000157065 728 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Col11a2Q64739 Gm19246-201ENSMUST00000173599 255 ntBASIC13.96□□□□□ -0.17
Col11a2Q64739 Ly6l-201ENSMUST00000177479 430 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Col11a2Q64739 Gm37851-201ENSMUST00000193871 889 ntBASIC13.96□□□□□ -0.17
Col11a2Q64739 Gm45040-201ENSMUST00000207742 578 ntTSL 3 BASIC13.96□□□□□ -0.17
Col11a2Q64739 AC154213.1-201ENSMUST00000228234 583 ntBASIC13.96□□□□□ -0.17
Col11a2Q64739 C330021F23Rik-201ENSMUST00000086479 1111 ntAPPRIS P2 TSL 5 BASIC13.96□□□□□ -0.17
Col11a2Q64739 Gm10233-201ENSMUST00000089275 628 ntBASIC13.96□□□□□ -0.17
Col11a2Q64739 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Col11a2Q64739 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Col11a2Q64739 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Col11a2Q64739 4833422M21Rik-203ENSMUST00000181747 1365 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Col11a2Q64739 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Col11a2Q64739 Zfp85os-202ENSMUST00000143812 1784 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Col11a2Q64739 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Col11a2Q64739 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
Col11a2Q64739 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Col11a2Q64739 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Col11a2Q64739 Gm7224-201ENSMUST00000121359 2066 ntBASIC13.96□□□□□ -0.18
Col11a2Q64739 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
Col11a2Q64739 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Col11a2Q64739 Gm44573-201ENSMUST00000191753 2370 ntBASIC13.96□□□□□ -0.18
Col11a2Q64739 Slc35a4-201ENSMUST00000036158 2462 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Col11a2Q64739 Il33-201ENSMUST00000025724 2544 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Col11a2Q64739 Ptgds-203ENSMUST00000114259 775 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
Col11a2Q64739 Gm12986-201ENSMUST00000119037 967 ntBASIC13.95□□□□□ -0.18
Col11a2Q64739 Gm12705-201ENSMUST00000129460 872 ntTSL 2 BASIC13.95□□□□□ -0.18
Col11a2Q64739 C030013C21Rik-201ENSMUST00000133400 795 ntTSL 3 BASIC13.95□□□□□ -0.18
Col11a2Q64739 Gm26174-201ENSMUST00000158415 219 ntBASIC13.95□□□□□ -0.18
Col11a2Q64739 Gm5294-201ENSMUST00000179205 651 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Col11a2Q64739 Tmem242-202ENSMUST00000185896 780 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Col11a2Q64739 Rp9-204ENSMUST00000216973 796 ntAPPRIS ALT2 TSL 3 BASIC13.95□□□□□ -0.18
Col11a2Q64739 Rhno1-207ENSMUST00000223237 1081 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
Col11a2Q64739 Ggta1-201ENSMUST00000044255 1221 ntAPPRIS P3 TSL 5 BASIC13.95□□□□□ -0.18
Col11a2Q64739 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Col11a2Q64739 5930430L01Rik-201ENSMUST00000145042 3994 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Col11a2Q64739 4930555A03Rik-201ENSMUST00000196052 1556 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms