Protein–RNA interactions for Protein: Q60847

Col12a1, Collagen alpha-1(XII) chain, mousemouse

Predictions only

Length 3,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col12a1Q60847 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Col12a1Q60847 Mir1190-201ENSMUST00000116925 96 ntBASIC11.33□□□□□ -0.6
Col12a1Q60847 Gm18733-202ENSMUST00000174447 401 ntBASIC11.33□□□□□ -0.6
Col12a1Q60847 Gm26918-201ENSMUST00000182496 728 ntTSL 2 BASIC11.33□□□□□ -0.6
Col12a1Q60847 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Col12a1Q60847 Ghrl-203ENSMUST00000203588 237 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Col12a1Q60847 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC11.33□□□□□ -0.6
Col12a1Q60847 Gm29689-201ENSMUST00000221076 589 ntBASIC11.33□□□□□ -0.6
Col12a1Q60847 Hesx1-202ENSMUST00000224331 983 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Col12a1Q60847 Nsmce2-203ENSMUST00000227173 1122 ntBASIC11.33□□□□□ -0.6
Col12a1Q60847 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Col12a1Q60847 Pfkfb2-208ENSMUST00000187089 1690 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Col12a1Q60847 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Col12a1Q60847 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Col12a1Q60847 Zmat1-201ENSMUST00000064659 3501 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Col12a1Q60847 Gm7405-201ENSMUST00000121476 1337 ntBASIC11.33□□□□□ -0.6
Col12a1Q60847 Gm37634-201ENSMUST00000195700 650 ntTSL 3 BASIC11.33□□□□□ -0.6
Col12a1Q60847 Gm44917-201ENSMUST00000208798 520 ntBASIC11.33□□□□□ -0.6
Col12a1Q60847 Gm18391-201ENSMUST00000217189 658 ntBASIC11.33□□□□□ -0.6
Col12a1Q60847 Gm7242-201ENSMUST00000221134 705 ntBASIC11.33□□□□□ -0.6
Col12a1Q60847 AC134913.2-201ENSMUST00000225017 771 ntBASIC11.33□□□□□ -0.6
Col12a1Q60847 Olfr1395-201ENSMUST00000059379 954 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Col12a1Q60847 Brd4-202ENSMUST00000114475 2731 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Col12a1Q60847 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Col12a1Q60847 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Col12a1Q60847 Sdccag8-201ENSMUST00000027785 2776 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Col12a1Q60847 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Col12a1Q60847 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Col12a1Q60847 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Col12a1Q60847 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Col12a1Q60847 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Col12a1Q60847 Ifna5-201ENSMUST00000102804 570 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Col12a1Q60847 Gm3409-201ENSMUST00000110597 952 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Col12a1Q60847 1700037C06Rik-201ENSMUST00000132824 874 ntBASIC11.32□□□□□ -0.6
Col12a1Q60847 Gm16227-201ENSMUST00000160088 563 ntTSL 3 BASIC11.32□□□□□ -0.6
Col12a1Q60847 Vmn2r-ps9-201ENSMUST00000177446 1099 ntBASIC11.32□□□□□ -0.6
Col12a1Q60847 1700021P04Rik-201ENSMUST00000178667 659 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Col12a1Q60847 CT025531.1-201ENSMUST00000214534 622 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Col12a1Q60847 CT571271.1-201ENSMUST00000227071 670 ntBASIC11.32□□□□□ -0.6
Col12a1Q60847 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
Col12a1Q60847 Mest-210ENSMUST00000157040 2383 ntAPPRIS ALT1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Col12a1Q60847 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Col12a1Q60847 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Col12a1Q60847 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Col12a1Q60847 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Col12a1Q60847 Gm5421-201ENSMUST00000181698 2354 ntBASIC11.32□□□□□ -0.6
Col12a1Q60847 Dck-201ENSMUST00000031311 3078 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Col12a1Q60847 Gm19692-201ENSMUST00000203856 2084 ntBASIC11.32□□□□□ -0.6
Col12a1Q60847 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Col12a1Q60847 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Col12a1Q60847 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Col12a1Q60847 Mir705-201ENSMUST00000102058 82 ntBASIC11.32□□□□□ -0.6
Col12a1Q60847 B230307C23Rik-202ENSMUST00000122450 1298 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Col12a1Q60847 Gm42908-201ENSMUST00000197508 870 ntBASIC11.32□□□□□ -0.6
Col12a1Q60847 CT030166.5-201ENSMUST00000222249 420 ntBASIC11.32□□□□□ -0.6
Col12a1Q60847 Gimap7-201ENSMUST00000052503 1269 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Col12a1Q60847 Catsperz-201ENSMUST00000057716 781 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Col12a1Q60847 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Col12a1Q60847 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Col12a1Q60847 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Col12a1Q60847 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Col12a1Q60847 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC11.32□□□□□ -0.6
Col12a1Q60847 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Col12a1Q60847 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Col12a1Q60847 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Col12a1Q60847 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC11.32□□□□□ -0.6
Col12a1Q60847 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Col12a1Q60847 Aldoa-202ENSMUST00000087566 1549 ntTSL 5 BASIC11.31□□□□□ -0.6
Col12a1Q60847 Clps-202ENSMUST00000114785 369 ntTSL 2 BASIC11.31□□□□□ -0.6
Col12a1Q60847 Gm11544-201ENSMUST00000120215 382 ntBASIC11.31□□□□□ -0.6
Col12a1Q60847 Gm13031-201ENSMUST00000140501 924 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Col12a1Q60847 Pax4-202ENSMUST00000164519 1229 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Col12a1Q60847 Pax4-203ENSMUST00000171089 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Col12a1Q60847 Gm6291-201ENSMUST00000179994 309 ntBASIC11.31□□□□□ -0.6
Col12a1Q60847 Gm27168-201ENSMUST00000183394 361 ntTSL 3 BASIC11.31□□□□□ -0.6
Col12a1Q60847 Gm44540-201ENSMUST00000205640 354 ntBASIC11.31□□□□□ -0.6
Col12a1Q60847 Gm33016-201ENSMUST00000221224 677 ntTSL 3 BASIC11.31□□□□□ -0.6
Col12a1Q60847 Gm9701-201ENSMUST00000077976 427 ntBASIC11.31□□□□□ -0.6
Col12a1Q60847 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Col12a1Q60847 Dpep1-201ENSMUST00000019422 2236 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Col12a1Q60847 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Col12a1Q60847 Gm19299-202ENSMUST00000215724 1435 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Col12a1Q60847 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Col12a1Q60847 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Col12a1Q60847 Adgb-201ENSMUST00000045328 1893 ntTSL 2 BASIC11.31□□□□□ -0.6
Col12a1Q60847 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Col12a1Q60847 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Col12a1Q60847 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Col12a1Q60847 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Col12a1Q60847 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Col12a1Q60847 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Col12a1Q60847 Acsf2-201ENSMUST00000103164 3154 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Col12a1Q60847 Sgk1-203ENSMUST00000100036 2476 ntTSL 5 BASIC11.31□□□□□ -0.6
Col12a1Q60847 Sgk1-201ENSMUST00000020145 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Col12a1Q60847 Palm2-201ENSMUST00000102904 2958 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Col12a1Q60847 Gm15540-201ENSMUST00000136052 674 ntTSL 2 BASIC11.31□□□□□ -0.6
Col12a1Q60847 Gm11655-201ENSMUST00000153899 765 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Col12a1Q60847 Gm15831-201ENSMUST00000156195 516 ntTSL 2 BASIC11.31□□□□□ -0.6
Col12a1Q60847 Gm44696-201ENSMUST00000181943 1229 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Col12a1Q60847 Gm8601-201ENSMUST00000182096 909 ntBASIC11.31□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms