Protein–RNA interactions for Protein: P56873

Sssca1, Sjoegren syndrome/scleroderma autoantigen 1 homolog, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sssca1P56873 Pyurf-201ENSMUST00000053386 3573 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Sssca1P56873 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC9.51□□□□□ -0.89
Sssca1P56873 Pcdh10-202ENSMUST00000170695 8234 ntAPPRIS P3 TSL 1 (best) BASIC9.51□□□□□ -0.89
Sssca1P56873 Gtf2i-224ENSMUST00000174772 4078 ntAPPRIS ALT2 TSL 2 BASIC9.51□□□□□ -0.89
Sssca1P56873 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC9.51□□□□□ -0.89
Sssca1P56873 Uqcc1-203ENSMUST00000109632 2313 ntTSL 5 BASIC9.51□□□□□ -0.89
Sssca1P56873 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Sssca1P56873 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC9.51□□□□□ -0.89
Sssca1P56873 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Sssca1P56873 Wdr75-201ENSMUST00000027139 2953 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Sssca1P56873 Sirt5-201ENSMUST00000066804 1367 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Sssca1P56873 Cox15-201ENSMUST00000045562 4798 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Sssca1P56873 Smc4-202ENSMUST00000107803 3983 ntTSL 5 BASIC9.51□□□□□ -0.89
Sssca1P56873 Myo1h-210ENSMUST00000202006 4631 ntAPPRIS P2 TSL 5 BASIC9.51□□□□□ -0.89
Sssca1P56873 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC9.51□□□□□ -0.89
Sssca1P56873 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Sssca1P56873 Kat6b-201ENSMUST00000069648 7649 ntAPPRIS ALT2 TSL 5 BASIC9.51□□□□□ -0.89
Sssca1P56873 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Sssca1P56873 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Sssca1P56873 Sfrp4-203ENSMUST00000222464 4049 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Sssca1P56873 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Sssca1P56873 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC9.51□□□□□ -0.89
Sssca1P56873 Gm45496-201ENSMUST00000209918 2917 ntBASIC9.51□□□□□ -0.89
Sssca1P56873 Uspl1-201ENSMUST00000050472 3757 ntAPPRIS P4 TSL 1 (best) BASIC9.51□□□□□ -0.89
Sssca1P56873 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC9.51□□□□□ -0.89
Sssca1P56873 Gm43242-201ENSMUST00000199507 1776 ntBASIC9.51□□□□□ -0.89
Sssca1P56873 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC9.51□□□□□ -0.89
Sssca1P56873 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Sssca1P56873 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC9.51□□□□□ -0.89
Sssca1P56873 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Sssca1P56873 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC9.51□□□□□ -0.89
Sssca1P56873 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC9.51□□□□□ -0.89
Sssca1P56873 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Sssca1P56873 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC9.51□□□□□ -0.89
Sssca1P56873 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC9.51□□□□□ -0.89
Sssca1P56873 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC9.51□□□□□ -0.89
Sssca1P56873 Gm8801-201ENSMUST00000173255 1064 ntBASIC9.51□□□□□ -0.89
Sssca1P56873 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC9.51□□□□□ -0.89
Sssca1P56873 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Sssca1P56873 Gm5597-201ENSMUST00000182353 1193 ntBASIC9.51□□□□□ -0.89
Sssca1P56873 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC9.51□□□□□ -0.89
Sssca1P56873 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC9.51□□□□□ -0.89
Sssca1P56873 Olfr1415-203ENSMUST00000204766 403 ntTSL 3 BASIC9.51□□□□□ -0.89
Sssca1P56873 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Sssca1P56873 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC9.51□□□□□ -0.89
Sssca1P56873 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC9.51□□□□□ -0.89
Sssca1P56873 Traf7-202ENSMUST00000088464 2504 ntAPPRIS P1 TSL 5 BASIC9.51□□□□□ -0.89
Sssca1P56873 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Sssca1P56873 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Sssca1P56873 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Sssca1P56873 Bcl2l14-201ENSMUST00000032321 2243 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Sssca1P56873 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Sssca1P56873 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Sssca1P56873 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC9.5□□□□□ -0.89
Sssca1P56873 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Sssca1P56873 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC9.5□□□□□ -0.89
Sssca1P56873 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC9.5□□□□□ -0.89
Sssca1P56873 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC9.5□□□□□ -0.89
Sssca1P56873 Gm18986-201ENSMUST00000216029 1986 ntBASIC9.5□□□□□ -0.89
Sssca1P56873 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Sssca1P56873 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Sssca1P56873 Gm42427-201ENSMUST00000200473 5292 ntBASIC9.5□□□□□ -0.89
Sssca1P56873 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Sssca1P56873 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Sssca1P56873 Pde5a-201ENSMUST00000066728 6939 ntAPPRIS P2 TSL 1 (best) BASIC9.5□□□□□ -0.89
Sssca1P56873 Kat7-203ENSMUST00000103159 3248 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Sssca1P56873 Rasgrp4-208ENSMUST00000161522 3242 ntTSL 5 BASIC9.5□□□□□ -0.89
Sssca1P56873 Pip5k1a-206ENSMUST00000107236 3618 ntAPPRIS P3 TSL 1 (best) BASIC9.5□□□□□ -0.89
Sssca1P56873 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC9.5□□□□□ -0.89
Sssca1P56873 Mir1247-201ENSMUST00000116706 82 ntBASIC9.5□□□□□ -0.89
Sssca1P56873 Gm11439-201ENSMUST00000118598 409 ntBASIC9.5□□□□□ -0.89
Sssca1P56873 Gm14441-201ENSMUST00000121960 540 ntBASIC9.5□□□□□ -0.89
Sssca1P56873 Gm13316-201ENSMUST00000140537 691 ntBASIC9.5□□□□□ -0.89
Sssca1P56873 Gm25043-201ENSMUST00000158604 212 ntBASIC9.5□□□□□ -0.89
Sssca1P56873 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Sssca1P56873 Gm2546-201ENSMUST00000182630 991 ntBASIC9.5□□□□□ -0.89
Sssca1P56873 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC9.5□□□□□ -0.89
Sssca1P56873 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC9.5□□□□□ -0.89
Sssca1P56873 Gm43002-201ENSMUST00000200310 155 ntBASIC9.5□□□□□ -0.89
Sssca1P56873 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC9.5□□□□□ -0.89
Sssca1P56873 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Sssca1P56873 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC9.5□□□□□ -0.89
Sssca1P56873 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC9.5□□□□□ -0.89
Sssca1P56873 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Sssca1P56873 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Sssca1P56873 Gm19221-201ENSMUST00000221827 1477 ntBASIC9.5□□□□□ -0.89
Sssca1P56873 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Sssca1P56873 Tsc2-201ENSMUST00000097373 6018 ntAPPRIS P2 TSL 1 (best) BASIC9.5□□□□□ -0.89
Sssca1P56873 A130010J15Rik-204ENSMUST00000161235 2097 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Sssca1P56873 BC024139-202ENSMUST00000089654 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC9.5□□□□□ -0.89
Sssca1P56873 Gper1-201ENSMUST00000066211 2537 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Sssca1P56873 Tgfbr1-201ENSMUST00000007757 5756 ntAPPRIS P3 TSL 1 (best) BASIC9.5□□□□□ -0.89
Sssca1P56873 Gm15163-201ENSMUST00000120749 1302 ntBASIC9.5□□□□□ -0.89
Sssca1P56873 Syt11-203ENSMUST00000107505 5020 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Sssca1P56873 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC9.5□□□□□ -0.89
Sssca1P56873 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC9.5□□□□□ -0.89
Sssca1P56873 Zfp646-201ENSMUST00000050383 6310 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Sssca1P56873 Atp6v1a-201ENSMUST00000063661 3896 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Sssca1P56873 2310043M15Rik-201ENSMUST00000180967 1580 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Sssca1P56873 Kifc5b-201ENSMUST00000078961 2627 ntAPPRIS P1 TSL 5 BASIC9.5□□□□□ -0.89
Retrieved 100 of 76,532 protein–RNA pairs in 59 ms