Protein–RNA interactions for Protein: P54254

Atxn1, Ataxin-1, mousemouse

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn1P54254 Gm13276-201ENSMUST00000179372 549 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Atxn1P54254 Gm13287-201ENSMUST00000179490 549 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Atxn1P54254 CT571245.2-201ENSMUST00000218421 305 ntBASIC11.76□□□□□ -0.53
Atxn1P54254 Gm9661-201ENSMUST00000221611 1122 ntBASIC11.76□□□□□ -0.53
Atxn1P54254 AC165260.2-203ENSMUST00000224237 336 ntBASIC11.76□□□□□ -0.53
Atxn1P54254 AC154305.4-201ENSMUST00000224520 614 ntBASIC11.76□□□□□ -0.53
Atxn1P54254 Aimp1-201ENSMUST00000029663 1126 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Atxn1P54254 Gm13271-201ENSMUST00000094992 549 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Atxn1P54254 Gm10334-201ENSMUST00000095999 876 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Atxn1P54254 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC11.76□□□□□ -0.53
Atxn1P54254 Gm1995-201ENSMUST00000220838 2602 ntBASIC11.76□□□□□ -0.53
Atxn1P54254 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Atxn1P54254 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Atxn1P54254 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Atxn1P54254 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Atxn1P54254 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Atxn1P54254 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Atxn1P54254 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Atxn1P54254 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Atxn1P54254 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Atxn1P54254 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Atxn1P54254 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Atxn1P54254 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC11.76□□□□□ -0.53
Atxn1P54254 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Atxn1P54254 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Atxn1P54254 Gm7104-201ENSMUST00000179741 2532 ntBASIC11.76□□□□□ -0.53
Atxn1P54254 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Atxn1P54254 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Atxn1P54254 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Atxn1P54254 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Atxn1P54254 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Atxn1P54254 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Atxn1P54254 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Atxn1P54254 Psmc2-201ENSMUST00000030769 1785 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Atxn1P54254 5530401A14Rik-201ENSMUST00000021044 1836 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Atxn1P54254 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Atxn1P54254 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Atxn1P54254 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Atxn1P54254 AC123738.2-201ENSMUST00000223791 1899 ntBASIC11.75□□□□□ -0.53
Atxn1P54254 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Atxn1P54254 n-R5s64-201ENSMUST00000102019 119 ntBASIC11.75□□□□□ -0.53
Atxn1P54254 Krtap4-9-201ENSMUST00000105059 1059 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Atxn1P54254 Gm14274-201ENSMUST00000117182 615 ntBASIC11.75□□□□□ -0.53
Atxn1P54254 Gm11663-201ENSMUST00000117888 290 ntBASIC11.75□□□□□ -0.53
Atxn1P54254 Atp6v1g2-202ENSMUST00000118384 483 ntTSL 2 BASIC11.75□□□□□ -0.53
Atxn1P54254 Gm15409-201ENSMUST00000135240 520 ntTSL 2 BASIC11.75□□□□□ -0.53
Atxn1P54254 Prss36-208ENSMUST00000156152 1132 ntTSL 5 BASIC11.75□□□□□ -0.53
Atxn1P54254 Gm15744-201ENSMUST00000161734 213 ntBASIC11.75□□□□□ -0.53
Atxn1P54254 Hmgn3-201ENSMUST00000161796 862 ntAPPRIS ALT1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Atxn1P54254 Taar8c-201ENSMUST00000170267 1035 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Atxn1P54254 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC11.75□□□□□ -0.53
Atxn1P54254 Gm4654-201ENSMUST00000183305 982 ntBASIC11.75□□□□□ -0.53
Atxn1P54254 Gm27232-201ENSMUST00000184373 597 ntTSL 3 BASIC11.75□□□□□ -0.53
Atxn1P54254 A930005H10Rik-204ENSMUST00000185681 625 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Atxn1P54254 Mmp7-201ENSMUST00000018767 1068 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Atxn1P54254 A930005H10Rik-206ENSMUST00000188260 739 ntTSL 2 BASIC11.75□□□□□ -0.53
Atxn1P54254 Gm42629-201ENSMUST00000199063 1102 ntBASIC11.75□□□□□ -0.53
Atxn1P54254 Gm44421-201ENSMUST00000205064 1221 ntBASIC11.75□□□□□ -0.53
Atxn1P54254 Gm44953-201ENSMUST00000208745 1286 ntBASIC11.75□□□□□ -0.53
Atxn1P54254 Nps-202ENSMUST00000210697 1082 ntTSL 5 BASIC11.75□□□□□ -0.53
Atxn1P54254 CT485606.1-201ENSMUST00000213187 878 ntBASIC11.75□□□□□ -0.53
Atxn1P54254 AC168279.1-201ENSMUST00000214611 382 ntBASIC11.75□□□□□ -0.53
Atxn1P54254 AC160028.1-201ENSMUST00000219645 1095 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Atxn1P54254 AC102368.1-201ENSMUST00000227161 892 ntBASIC11.75□□□□□ -0.53
Atxn1P54254 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Atxn1P54254 Taar8a-201ENSMUST00000051133 1035 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Atxn1P54254 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Atxn1P54254 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Atxn1P54254 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Atxn1P54254 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Atxn1P54254 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Atxn1P54254 4932431P20Rik-201ENSMUST00000098602 1340 ntBASIC11.75□□□□□ -0.53
Atxn1P54254 Gm43051-201ENSMUST00000201096 2678 ntBASIC11.75□□□□□ -0.53
Atxn1P54254 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Atxn1P54254 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Atxn1P54254 Lta-201ENSMUST00000025266 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Atxn1P54254 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC11.75□□□□□ -0.53
Atxn1P54254 Gm7224-201ENSMUST00000121359 2066 ntBASIC11.75□□□□□ -0.53
Atxn1P54254 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Atxn1P54254 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC11.75□□□□□ -0.53
Atxn1P54254 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC11.75□□□□□ -0.53
Atxn1P54254 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Atxn1P54254 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Atxn1P54254 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Atxn1P54254 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Atxn1P54254 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Atxn1P54254 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC11.74□□□□□ -0.53
Atxn1P54254 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Atxn1P54254 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Atxn1P54254 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Atxn1P54254 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Atxn1P54254 Gm43858-201ENSMUST00000199418 1778 ntBASIC11.74□□□□□ -0.53
Atxn1P54254 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Atxn1P54254 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Atxn1P54254 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Atxn1P54254 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Atxn1P54254 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Atxn1P54254 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Atxn1P54254 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Atxn1P54254 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 61.5 ms