Protein–RNA interactions for Protein: P09025

Hoxc8, Homeobox protein Hox-C8, mousemouse

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc8P09025 AC164618.2-201ENSMUST00000224770 573 ntBASIC12.49□□□□□ -0.41
Hoxc8P09025 Fkbpl-201ENSMUST00000036720 1270 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Hoxc8P09025 Lxn-201ENSMUST00000058981 1112 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Hoxc8P09025 Vmn1r222-201ENSMUST00000077116 1054 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Hoxc8P09025 Gm3402-202ENSMUST00000077133 924 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Hoxc8P09025 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Hoxc8P09025 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC12.49□□□□□ -0.41
Hoxc8P09025 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Hoxc8P09025 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Hoxc8P09025 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Hoxc8P09025 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Hoxc8P09025 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Hoxc8P09025 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Hoxc8P09025 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Hoxc8P09025 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Hoxc8P09025 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Hoxc8P09025 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Hoxc8P09025 Gm18986-201ENSMUST00000216029 1986 ntBASIC12.49□□□□□ -0.41
Hoxc8P09025 Gm43463-201ENSMUST00000195967 1803 ntBASIC12.48□□□□□ -0.41
Hoxc8P09025 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Hoxc8P09025 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Hoxc8P09025 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Hoxc8P09025 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Hoxc8P09025 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Hoxc8P09025 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Hoxc8P09025 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Hoxc8P09025 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Hoxc8P09025 Gm43760-201ENSMUST00000202120 3015 ntBASIC12.48□□□□□ -0.41
Hoxc8P09025 Ptges3l-203ENSMUST00000107252 853 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Hoxc8P09025 Ice2-202ENSMUST00000117246 1201 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Hoxc8P09025 Gm8302-201ENSMUST00000119217 852 ntBASIC12.48□□□□□ -0.41
Hoxc8P09025 Gm16341-201ENSMUST00000126385 377 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Hoxc8P09025 Gm28038-201ENSMUST00000143119 378 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Hoxc8P09025 Gm5342-201ENSMUST00000181982 1003 ntBASIC12.48□□□□□ -0.41
Hoxc8P09025 Clec7a-202ENSMUST00000184581 707 ntAPPRIS P2 TSL 3 BASIC12.48□□□□□ -0.41
Hoxc8P09025 Gm28833-201ENSMUST00000189671 559 ntBASIC12.48□□□□□ -0.41
Hoxc8P09025 Gm5599-201ENSMUST00000209602 788 ntBASIC12.48□□□□□ -0.41
Hoxc8P09025 Gm6722-201ENSMUST00000221586 390 ntBASIC12.48□□□□□ -0.41
Hoxc8P09025 AC156568.1-201ENSMUST00000223018 712 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Hoxc8P09025 AC154176.1-201ENSMUST00000225897 220 ntBASIC12.48□□□□□ -0.41
Hoxc8P09025 AC154572.1-201ENSMUST00000226098 1204 ntBASIC12.48□□□□□ -0.41
Hoxc8P09025 CT025602.2-201ENSMUST00000226553 772 ntBASIC12.48□□□□□ -0.41
Hoxc8P09025 Gm13306-201ENSMUST00000098122 418 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Hoxc8P09025 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Hoxc8P09025 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Hoxc8P09025 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Hoxc8P09025 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Hoxc8P09025 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC12.48□□□□□ -0.41
Hoxc8P09025 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Hoxc8P09025 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Hoxc8P09025 Gm43570-201ENSMUST00000199951 3688 ntBASIC12.48□□□□□ -0.41
Hoxc8P09025 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Hoxc8P09025 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC12.48□□□□□ -0.41
Hoxc8P09025 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hoxc8P09025 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hoxc8P09025 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Hoxc8P09025 Gm15622-201ENSMUST00000143025 1464 ntTSL 5 BASIC12.47□□□□□ -0.41
Hoxc8P09025 Stk31-201ENSMUST00000024171 3237 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hoxc8P09025 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hoxc8P09025 Tia1-211ENSMUST00000130967 1445 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Hoxc8P09025 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hoxc8P09025 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hoxc8P09025 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Hoxc8P09025 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hoxc8P09025 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Hoxc8P09025 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hoxc8P09025 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC12.47□□□□□ -0.41
Hoxc8P09025 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hoxc8P09025 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Hoxc8P09025 Sun3-202ENSMUST00000102909 1205 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hoxc8P09025 Trmt10b-202ENSMUST00000107800 983 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Hoxc8P09025 Gm11560-201ENSMUST00000117567 948 ntBASIC12.47□□□□□ -0.41
Hoxc8P09025 Gm12194-201ENSMUST00000117756 1012 ntBASIC12.47□□□□□ -0.41
Hoxc8P09025 1700123M08Rik-202ENSMUST00000146154 770 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Hoxc8P09025 Parvaos-201ENSMUST00000154848 1285 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Hoxc8P09025 Gm43692-201ENSMUST00000198236 1062 ntBASIC12.47□□□□□ -0.41
Hoxc8P09025 AC153887.1-201ENSMUST00000219154 1253 ntTSL 5 BASIC12.47□□□□□ -0.41
Hoxc8P09025 Nudt2-201ENSMUST00000030154 845 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hoxc8P09025 Rps10-ps1-201ENSMUST00000074353 495 ntBASIC12.47□□□□□ -0.41
Hoxc8P09025 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hoxc8P09025 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hoxc8P09025 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hoxc8P09025 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hoxc8P09025 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hoxc8P09025 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC12.47□□□□□ -0.41
Hoxc8P09025 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
Hoxc8P09025 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Hoxc8P09025 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Hoxc8P09025 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hoxc8P09025 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hoxc8P09025 Gm43364-201ENSMUST00000196046 3274 ntBASIC12.47□□□□□ -0.41
Hoxc8P09025 Tarm1-203ENSMUST00000203821 1535 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hoxc8P09025 Gm27177-202ENSMUST00000183514 2703 ntBASIC12.46□□□□□ -0.41
Hoxc8P09025 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Hoxc8P09025 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Hoxc8P09025 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Hoxc8P09025 Arih1-202ENSMUST00000165322 1431 ntTSL 5 BASIC12.46□□□□□ -0.41
Hoxc8P09025 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Hoxc8P09025 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Hoxc8P09025 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 106.1 ms