Protein–RNA interactions for Protein: O70400

Pdlim1, PDZ and LIM domain protein 1, mousemouse

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim1O70400 Gm38314-201ENSMUST00000195709 625 ntBASIC11.7□□□□□ -0.54
Pdlim1O70400 Gm26047-202ENSMUST00000198840 115 ntBASIC11.7□□□□□ -0.54
Pdlim1O70400 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC11.7□□□□□ -0.54
Pdlim1O70400 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC11.7□□□□□ -0.54
Pdlim1O70400 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC11.7□□□□□ -0.54
Pdlim1O70400 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC11.7□□□□□ -0.54
Pdlim1O70400 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pdlim1O70400 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pdlim1O70400 Gm10288-201ENSMUST00000084614 537 ntBASIC11.7□□□□□ -0.54
Pdlim1O70400 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pdlim1O70400 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pdlim1O70400 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Pdlim1O70400 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pdlim1O70400 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Pdlim1O70400 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Pdlim1O70400 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pdlim1O70400 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pdlim1O70400 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Pdlim1O70400 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Pdlim1O70400 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pdlim1O70400 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Pdlim1O70400 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pdlim1O70400 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Pdlim1O70400 Gm43064-201ENSMUST00000199710 3144 ntAPPRIS P1 TSL 2 BASIC11.69□□□□□ -0.54
Pdlim1O70400 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC11.69□□□□□ -0.54
Pdlim1O70400 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pdlim1O70400 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pdlim1O70400 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pdlim1O70400 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pdlim1O70400 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Pdlim1O70400 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Pdlim1O70400 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Pdlim1O70400 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Pdlim1O70400 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pdlim1O70400 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC11.69□□□□□ -0.54
Pdlim1O70400 AC166574.4-201ENSMUST00000227165 1937 ntBASIC11.69□□□□□ -0.54
Pdlim1O70400 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC11.69□□□□□ -0.54
Pdlim1O70400 Gm11450-201ENSMUST00000121144 333 ntBASIC11.69□□□□□ -0.54
Pdlim1O70400 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC11.69□□□□□ -0.54
Pdlim1O70400 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Pdlim1O70400 Mir6927-201ENSMUST00000184494 71 ntBASIC11.69□□□□□ -0.54
Pdlim1O70400 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Pdlim1O70400 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pdlim1O70400 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pdlim1O70400 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Pdlim1O70400 Gm5537-201ENSMUST00000091117 1252 ntBASIC11.69□□□□□ -0.54
Pdlim1O70400 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Pdlim1O70400 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pdlim1O70400 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pdlim1O70400 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pdlim1O70400 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Pdlim1O70400 Edc4-202ENSMUST00000119261 4645 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pdlim1O70400 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Pdlim1O70400 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC11.69□□□□□ -0.54
Pdlim1O70400 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pdlim1O70400 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pdlim1O70400 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Pdlim1O70400 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Pdlim1O70400 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Pdlim1O70400 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC11.68□□□□□ -0.54
Pdlim1O70400 Gm6580-201ENSMUST00000117504 1357 ntBASIC11.68□□□□□ -0.54
Pdlim1O70400 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC11.68□□□□□ -0.54
Pdlim1O70400 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pdlim1O70400 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pdlim1O70400 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pdlim1O70400 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Pdlim1O70400 Kif2c-202ENSMUST00000106436 2378 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Pdlim1O70400 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pdlim1O70400 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pdlim1O70400 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pdlim1O70400 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pdlim1O70400 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pdlim1O70400 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pdlim1O70400 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Pdlim1O70400 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC11.68□□□□□ -0.54
Pdlim1O70400 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Pdlim1O70400 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC11.68□□□□□ -0.54
Pdlim1O70400 Gm13035-201ENSMUST00000117496 342 ntBASIC11.68□□□□□ -0.54
Pdlim1O70400 Gm15515-201ENSMUST00000117827 822 ntBASIC11.68□□□□□ -0.54
Pdlim1O70400 Gm11941-201ENSMUST00000119904 610 ntBASIC11.68□□□□□ -0.54
Pdlim1O70400 Gm12201-201ENSMUST00000120657 1234 ntBASIC11.68□□□□□ -0.54
Pdlim1O70400 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Pdlim1O70400 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC11.68□□□□□ -0.54
Pdlim1O70400 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC11.68□□□□□ -0.54
Pdlim1O70400 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC11.68□□□□□ -0.54
Pdlim1O70400 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Pdlim1O70400 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC11.68□□□□□ -0.54
Pdlim1O70400 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Pdlim1O70400 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC11.68□□□□□ -0.54
Pdlim1O70400 Gm5714-201ENSMUST00000197343 566 ntBASIC11.68□□□□□ -0.54
Pdlim1O70400 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Pdlim1O70400 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Pdlim1O70400 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC11.68□□□□□ -0.54
Pdlim1O70400 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Pdlim1O70400 Gm7848-201ENSMUST00000210739 718 ntBASIC11.68□□□□□ -0.54
Pdlim1O70400 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC11.68□□□□□ -0.54
Pdlim1O70400 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pdlim1O70400 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pdlim1O70400 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC11.68□□□□□ -0.54
Pdlim1O70400 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 119.2 ms