Protein–RNA interactions for Protein: O35137

Alx4, Homeobox protein aristaless-like 4, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx4O35137 Anxa6-201ENSMUST00000102727 2471 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
Alx4O35137 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.72
Alx4O35137 Tmc7-201ENSMUST00000044195 4546 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Alx4O35137 Gm5847-201ENSMUST00000178959 1595 ntBASIC10.52□□□□□ -0.72
Alx4O35137 Cyp26b1-202ENSMUST00000168003 4170 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Alx4O35137 Wdr13-201ENSMUST00000033506 4183 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Alx4O35137 Cyp26b1-201ENSMUST00000077705 4157 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Alx4O35137 Slc9a3-203ENSMUST00000221703 5118 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.72
Alx4O35137 C2cd5-204ENSMUST00000203187 3494 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
Alx4O35137 Akap5-203ENSMUST00000172992 2711 ntAPPRIS ALT2 TSL 3 BASIC10.52□□□□□ -0.72
Alx4O35137 Steap3-201ENSMUST00000112639 2931 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Alx4O35137 Gm29245-201ENSMUST00000187332 1416 ntBASIC10.52□□□□□ -0.73
Alx4O35137 Fut8-203ENSMUST00000177595 2980 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Alx4O35137 AC165351.1-201ENSMUST00000219078 2020 ntBASIC10.52□□□□□ -0.73
Alx4O35137 Nefl-201ENSMUST00000022639 3380 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Alx4O35137 Ccl22-201ENSMUST00000034231 2216 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Alx4O35137 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Alx4O35137 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
Alx4O35137 Gm14644-201ENSMUST00000116671 647 ntBASIC10.52□□□□□ -0.73
Alx4O35137 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Alx4O35137 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
Alx4O35137 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Alx4O35137 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Alx4O35137 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC10.52□□□□□ -0.73
Alx4O35137 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC10.52□□□□□ -0.73
Alx4O35137 Gm5950-201ENSMUST00000213337 772 ntBASIC10.52□□□□□ -0.73
Alx4O35137 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC10.52□□□□□ -0.73
Alx4O35137 AC126253.1-201ENSMUST00000227974 824 ntBASIC10.52□□□□□ -0.73
Alx4O35137 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Alx4O35137 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Alx4O35137 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Alx4O35137 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
Alx4O35137 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Alx4O35137 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Alx4O35137 B230317F23Rik-201ENSMUST00000052189 2472 ntBASIC10.52□□□□□ -0.73
Alx4O35137 Dcun1d3-202ENSMUST00000098080 3072 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Alx4O35137 Hdac7-205ENSMUST00000118294 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Alx4O35137 Smc3-201ENSMUST00000025930 4851 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Alx4O35137 Lpar1-203ENSMUST00000107571 3543 ntAPPRIS P3 TSL 5 BASIC10.52□□□□□ -0.73
Alx4O35137 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
Alx4O35137 Dcun1d2-201ENSMUST00000045366 2748 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Alx4O35137 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Alx4O35137 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Alx4O35137 Bco1-202ENSMUST00000167370 1747 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
Alx4O35137 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC10.52□□□□□ -0.73
Alx4O35137 Spag16-202ENSMUST00000113940 3559 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Alx4O35137 Corin-202ENSMUST00000167460 4639 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Alx4O35137 Gm13404-201ENSMUST00000156633 1960 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Alx4O35137 Mroh1-201ENSMUST00000092595 5111 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Alx4O35137 Tex2-202ENSMUST00000103070 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Alx4O35137 Helq-201ENSMUST00000044684 3689 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Alx4O35137 Dync1i2-201ENSMUST00000081710 2631 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
Alx4O35137 Mybpc3-202ENSMUST00000137942 4134 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
Alx4O35137 Tmcc1-210ENSMUST00000204353 2851 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Alx4O35137 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Alx4O35137 Ubxn10-202ENSMUST00000105810 3304 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Alx4O35137 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Alx4O35137 Gabra1-201ENSMUST00000020707 4688 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Alx4O35137 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC10.51□□□□□ -0.73
Alx4O35137 Ccnk-202ENSMUST00000221167 2789 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Alx4O35137 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC10.51□□□□□ -0.73
Alx4O35137 Lef1-201ENSMUST00000029611 3482 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Alx4O35137 Hr-205ENSMUST00000163060 5278 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
Alx4O35137 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Alx4O35137 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Alx4O35137 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Alx4O35137 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC10.51□□□□□ -0.73
Alx4O35137 Gm13449-201ENSMUST00000153559 1231 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Alx4O35137 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Alx4O35137 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC10.51□□□□□ -0.73
Alx4O35137 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
Alx4O35137 Gm19287-201ENSMUST00000203190 358 ntBASIC10.51□□□□□ -0.73
Alx4O35137 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Alx4O35137 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC10.51□□□□□ -0.73
Alx4O35137 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC10.51□□□□□ -0.73
Alx4O35137 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Alx4O35137 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC10.51□□□□□ -0.73
Alx4O35137 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Alx4O35137 Cysrt1-201ENSMUST00000043379 873 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Alx4O35137 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Alx4O35137 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Alx4O35137 Gm45449-201ENSMUST00000211485 1960 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Alx4O35137 Ddx56-201ENSMUST00000004507 1956 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Alx4O35137 Map4-214ENSMUST00000199498 4055 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Alx4O35137 Gm38089-201ENSMUST00000193585 1514 ntBASIC10.51□□□□□ -0.73
Alx4O35137 Lig1-211ENSMUST00000177588 3174 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
Alx4O35137 Ccdc162-212ENSMUST00000219054 3182 ntTSL 5 BASIC10.51□□□□□ -0.73
Alx4O35137 Cntnap4-201ENSMUST00000034225 4848 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Alx4O35137 Cdhr4-211ENSMUST00000177173 2480 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
Alx4O35137 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC10.51□□□□□ -0.73
Alx4O35137 Knop1-202ENSMUST00000063607 4884 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Alx4O35137 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC10.51□□□□□ -0.73
Alx4O35137 Gm38140-201ENSMUST00000193617 2755 ntBASIC10.51□□□□□ -0.73
Alx4O35137 Arfgap2-201ENSMUST00000028691 2791 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Alx4O35137 E230029C05Rik-203ENSMUST00000208028 2066 ntBASIC10.51□□□□□ -0.73
Alx4O35137 Vmn1r45-201ENSMUST00000054202 3341 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Alx4O35137 Slc26a2-202ENSMUST00000146409 7814 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Alx4O35137 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Alx4O35137 Slc4a9-202ENSMUST00000115694 2861 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
Alx4O35137 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC10.51□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 64.2 ms