Protein–RNA interactions for Protein: O08983

Hps1, Hermansky-Pudlak syndrome 1 protein homolog, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hps1O08983 Anp32e-204ENSMUST00000168106 2890 ntTSL 5 BASIC11.03□□□□□ -0.64
Hps1O08983 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Hps1O08983 Cox15-201ENSMUST00000045562 4798 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Hps1O08983 Synpo2l-202ENSMUST00000117386 3979 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Hps1O08983 Invs-201ENSMUST00000030029 5633 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Hps1O08983 Col11a1-201ENSMUST00000092155 7667 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Hps1O08983 Olfr1344-202ENSMUST00000218906 2590 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Hps1O08983 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Hps1O08983 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Hps1O08983 Rnf40-201ENSMUST00000033088 3906 ntTSL 5 BASIC11.03□□□□□ -0.64
Hps1O08983 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.64
Hps1O08983 Zbtb24-205ENSMUST00000216656 2476 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Hps1O08983 Zmynd8-205ENSMUST00000109266 5072 ntAPPRIS P4 TSL 1 (best) BASIC11.02□□□□□ -0.64
Hps1O08983 Zmynd8-221ENSMUST00000177633 5093 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.64
Hps1O08983 Arvcf-203ENSMUST00000115612 4218 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.64
Hps1O08983 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Hps1O08983 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC11.02□□□□□ -0.64
Hps1O08983 Slc38a3-202ENSMUST00000167868 3151 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Hps1O08983 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Hps1O08983 Sema4c-208ENSMUST00000195620 3640 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Hps1O08983 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Hps1O08983 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Hps1O08983 Mthfr-201ENSMUST00000069604 6072 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.64
Hps1O08983 Ftsj1-201ENSMUST00000033513 3425 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Hps1O08983 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Hps1O08983 Entpd8-203ENSMUST00000114380 2301 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.64
Hps1O08983 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.64
Hps1O08983 Vcan-202ENSMUST00000109544 5702 ntTSL 5 BASIC11.02□□□□□ -0.65
Hps1O08983 Dll4-201ENSMUST00000102517 3747 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Hps1O08983 Mbd1-202ENSMUST00000224047 2838 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
Hps1O08983 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC11.02□□□□□ -0.65
Hps1O08983 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Hps1O08983 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Hps1O08983 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC11.02□□□□□ -0.65
Hps1O08983 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Hps1O08983 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Hps1O08983 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Hps1O08983 Snord83b-201ENSMUST00000104546 94 ntBASIC11.02□□□□□ -0.65
Hps1O08983 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
Hps1O08983 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC11.02□□□□□ -0.65
Hps1O08983 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Hps1O08983 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC11.02□□□□□ -0.65
Hps1O08983 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC11.02□□□□□ -0.65
Hps1O08983 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC11.02□□□□□ -0.65
Hps1O08983 Gm5896-201ENSMUST00000189662 1024 ntBASIC11.02□□□□□ -0.65
Hps1O08983 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC11.02□□□□□ -0.65
Hps1O08983 Ak6-205ENSMUST00000190729 1184 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Hps1O08983 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC11.02□□□□□ -0.65
Hps1O08983 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC11.02□□□□□ -0.65
Hps1O08983 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Hps1O08983 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Hps1O08983 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Hps1O08983 AC154517.2-201ENSMUST00000220829 2458 ntBASIC11.02□□□□□ -0.65
Hps1O08983 Myo9a-205ENSMUST00000135298 12198 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
Hps1O08983 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
Hps1O08983 AC164099.2-201ENSMUST00000227795 2005 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
Hps1O08983 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC11.02□□□□□ -0.65
Hps1O08983 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Hps1O08983 Gm8793-201ENSMUST00000183069 1303 ntBASIC11.02□□□□□ -0.65
Hps1O08983 Gm28035-201ENSMUST00000139454 4238 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Hps1O08983 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
Hps1O08983 Sec22b-201ENSMUST00000029476 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Hps1O08983 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Hps1O08983 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Hps1O08983 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Hps1O08983 Gabra1-201ENSMUST00000020707 4688 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Hps1O08983 Sez6l-206ENSMUST00000212758 2664 ntTSL 5 BASIC11.02□□□□□ -0.65
Hps1O08983 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Hps1O08983 Slc10a7-202ENSMUST00000209490 3485 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Hps1O08983 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Hps1O08983 Tnpo3-201ENSMUST00000012679 4251 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Hps1O08983 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Hps1O08983 Gm16083-201ENSMUST00000125681 2547 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Hps1O08983 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Hps1O08983 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Hps1O08983 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Hps1O08983 Pdzd7-203ENSMUST00000169459 3903 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Hps1O08983 Xirp1-201ENSMUST00000111635 5839 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Hps1O08983 Gm21986-201ENSMUST00000113671 5560 ntTSL 2 BASIC11.01□□□□□ -0.65
Hps1O08983 Zfp957-201ENSMUST00000040802 2613 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Hps1O08983 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Hps1O08983 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Hps1O08983 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Hps1O08983 Crebrf-203ENSMUST00000142539 2674 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Hps1O08983 Gm2606-201ENSMUST00000100754 1002 ntBASIC11.01□□□□□ -0.65
Hps1O08983 Bnip3l-ps-201ENSMUST00000101577 657 ntBASIC11.01□□□□□ -0.65
Hps1O08983 Gm24830-201ENSMUST00000102024 166 ntBASIC11.01□□□□□ -0.65
Hps1O08983 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC11.01□□□□□ -0.65
Hps1O08983 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC11.01□□□□□ -0.65
Hps1O08983 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC11.01□□□□□ -0.65
Hps1O08983 Pla2g1b-202ENSMUST00000112071 361 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Hps1O08983 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC11.01□□□□□ -0.65
Hps1O08983 Rmrp-201ENSMUST00000157463 271 ntBASIC11.01□□□□□ -0.65
Hps1O08983 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Hps1O08983 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC11.01□□□□□ -0.65
Hps1O08983 Gnpda2-207ENSMUST00000173927 1011 ntAPPRIS ALT1 TSL 5 BASIC11.01□□□□□ -0.65
Hps1O08983 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC11.01□□□□□ -0.65
Hps1O08983 Gm25890-201ENSMUST00000177643 165 ntBASIC11.01□□□□□ -0.65
Hps1O08983 Rnu1b2-201ENSMUST00000178073 165 ntBASIC11.01□□□□□ -0.65
Hps1O08983 Rnu1b1-201ENSMUST00000178250 165 ntBASIC11.01□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms