Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC14.24□□□□□ -0.13
NpcdF8VQB8 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NpcdF8VQB8 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
NpcdF8VQB8 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
NpcdF8VQB8 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
NpcdF8VQB8 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NpcdF8VQB8 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
NpcdF8VQB8 Gm43858-201ENSMUST00000199418 1778 ntBASIC14.24□□□□□ -0.13
NpcdF8VQB8 Platr19-201ENSMUST00000171380 1466 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
NpcdF8VQB8 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
NpcdF8VQB8 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NpcdF8VQB8 Rnf183-203ENSMUST00000107455 1432 ntAPPRIS P1 TSL 3 BASIC14.24□□□□□ -0.13
NpcdF8VQB8 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC14.23□□□□□ -0.13
NpcdF8VQB8 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
NpcdF8VQB8 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
NpcdF8VQB8 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
NpcdF8VQB8 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
NpcdF8VQB8 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
NpcdF8VQB8 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
NpcdF8VQB8 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
NpcdF8VQB8 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
NpcdF8VQB8 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
NpcdF8VQB8 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
NpcdF8VQB8 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC14.23□□□□□ -0.13
NpcdF8VQB8 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
NpcdF8VQB8 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
NpcdF8VQB8 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
NpcdF8VQB8 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
NpcdF8VQB8 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
NpcdF8VQB8 Trav13d-1-201ENSMUST00000103588 396 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
NpcdF8VQB8 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
NpcdF8VQB8 Ndufb5-204ENSMUST00000127477 1079 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
NpcdF8VQB8 Folr2-203ENSMUST00000210598 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
NpcdF8VQB8 Gm4811-201ENSMUST00000220879 1220 ntBASIC14.23□□□□□ -0.13
NpcdF8VQB8 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
NpcdF8VQB8 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
NpcdF8VQB8 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
NpcdF8VQB8 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC14.23□□□□□ -0.13
NpcdF8VQB8 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
NpcdF8VQB8 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
NpcdF8VQB8 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
NpcdF8VQB8 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
NpcdF8VQB8 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
NpcdF8VQB8 Olfr482-202ENSMUST00000217304 2612 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
NpcdF8VQB8 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
NpcdF8VQB8 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
NpcdF8VQB8 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
NpcdF8VQB8 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
NpcdF8VQB8 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
NpcdF8VQB8 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
NpcdF8VQB8 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC14.22□□□□□ -0.13
NpcdF8VQB8 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
NpcdF8VQB8 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
NpcdF8VQB8 Gm2000-201ENSMUST00000102782 445 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
NpcdF8VQB8 Gm14222-201ENSMUST00000128681 575 ntTSL 2 BASIC14.22□□□□□ -0.13
NpcdF8VQB8 Gm22379-201ENSMUST00000157480 131 ntBASIC14.22□□□□□ -0.13
NpcdF8VQB8 4732414G09Rik-202ENSMUST00000180695 408 ntTSL 3 BASIC14.22□□□□□ -0.13
NpcdF8VQB8 H2-Bl-203ENSMUST00000183999 358 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
NpcdF8VQB8 Gm18801-201ENSMUST00000186616 536 ntBASIC14.22□□□□□ -0.13
NpcdF8VQB8 Gm35025-203ENSMUST00000193519 634 ntTSL 3 BASIC14.22□□□□□ -0.13
NpcdF8VQB8 Gm38117-201ENSMUST00000194653 939 ntBASIC14.22□□□□□ -0.13
NpcdF8VQB8 Selenos-204ENSMUST00000206044 911 ntTSL 3 BASIC14.22□□□□□ -0.13
NpcdF8VQB8 AC170997.1-201ENSMUST00000214554 1053 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
NpcdF8VQB8 AC114645.1-201ENSMUST00000215831 187 ntBASIC14.22□□□□□ -0.13
NpcdF8VQB8 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
NpcdF8VQB8 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
NpcdF8VQB8 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
NpcdF8VQB8 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
NpcdF8VQB8 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
NpcdF8VQB8 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
NpcdF8VQB8 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
NpcdF8VQB8 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
NpcdF8VQB8 Anxa9-204ENSMUST00000164406 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
NpcdF8VQB8 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
NpcdF8VQB8 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC14.22□□□□□ -0.13
NpcdF8VQB8 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
NpcdF8VQB8 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
NpcdF8VQB8 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
NpcdF8VQB8 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
NpcdF8VQB8 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
NpcdF8VQB8 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
NpcdF8VQB8 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
NpcdF8VQB8 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
NpcdF8VQB8 Gm43868-201ENSMUST00000205187 2114 ntBASIC14.21□□□□□ -0.13
NpcdF8VQB8 Zkscan3-207ENSMUST00000223831 2101 ntBASIC14.21□□□□□ -0.13
NpcdF8VQB8 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
NpcdF8VQB8 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
NpcdF8VQB8 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
NpcdF8VQB8 Zfp125-201ENSMUST00000079237 2488 ntBASIC14.21□□□□□ -0.13
NpcdF8VQB8 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
NpcdF8VQB8 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
NpcdF8VQB8 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
NpcdF8VQB8 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
NpcdF8VQB8 Morf4l2-202ENSMUST00000080411 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
NpcdF8VQB8 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
NpcdF8VQB8 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
NpcdF8VQB8 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
NpcdF8VQB8 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC14.21□□□□□ -0.13
NpcdF8VQB8 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
NpcdF8VQB8 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms