Protein–RNA interactions for Protein: B1AVM1

Gm12887, Predicted gene 12887, mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12887B1AVM1 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC9.51□□□□□ -0.89
Gm12887B1AVM1 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Gm12887B1AVM1 Sgk1-201ENSMUST00000020145 2456 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Gm12887B1AVM1 Poldip3-202ENSMUST00000100375 3157 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Gm12887B1AVM1 Casc1-203ENSMUST00000111728 2682 ntAPPRIS ALT2 TSL 2 BASIC9.51□□□□□ -0.89
Gm12887B1AVM1 Dpysl4-201ENSMUST00000026551 3552 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Gm12887B1AVM1 Rab3gap2-201ENSMUST00000069652 7052 ntAPPRIS P2 TSL 5 BASIC9.51□□□□□ -0.89
Gm12887B1AVM1 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC9.51□□□□□ -0.89
Gm12887B1AVM1 Map3k12-208ENSMUST00000171565 4318 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Gm12887B1AVM1 Muc3-201ENSMUST00000041226 1853 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Gm12887B1AVM1 AC126257.1-201ENSMUST00000213195 1536 ntBASIC9.51□□□□□ -0.89
Gm12887B1AVM1 Tmem135-202ENSMUST00000117852 2986 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Gm12887B1AVM1 Phactr1-213ENSMUST00000148891 5307 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Gm12887B1AVM1 Ccdc162-212ENSMUST00000219054 3182 ntTSL 5 BASIC9.51□□□□□ -0.89
Gm12887B1AVM1 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Gm12887B1AVM1 Gm20671-201ENSMUST00000144673 1731 ntAPPRIS P1 TSL 5 BASIC9.51□□□□□ -0.89
Gm12887B1AVM1 9230105E05Rik-201ENSMUST00000161291 2250 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Gm12887B1AVM1 Cd6-202ENSMUST00000039043 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC9.5□□□□□ -0.89
Gm12887B1AVM1 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Gm12887B1AVM1 Src-204ENSMUST00000109531 3586 ntAPPRIS P1 TSL 5 BASIC9.5□□□□□ -0.89
Gm12887B1AVM1 Tmcc1-208ENSMUST00000173140 1910 ntTSL 5 BASIC9.5□□□□□ -0.89
Gm12887B1AVM1 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Gm12887B1AVM1 Ntrk2-207ENSMUST00000225488 4706 ntAPPRIS P1 BASIC9.5□□□□□ -0.89
Gm12887B1AVM1 Flad1-204ENSMUST00000129308 2892 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Gm12887B1AVM1 Olfr624-201ENSMUST00000062144 5731 ntAPPRIS P1 BASIC9.5□□□□□ -0.89
Gm12887B1AVM1 Mroh8-202ENSMUST00000143663 3460 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Gm12887B1AVM1 Erich3-203ENSMUST00000189969 3460 ntBASIC9.5□□□□□ -0.89
Gm12887B1AVM1 Hexim1-201ENSMUST00000053063 3495 ntAPPRIS P1 BASIC9.5□□□□□ -0.89
Gm12887B1AVM1 Mab21l2-201ENSMUST00000077524 2703 ntAPPRIS P1 BASIC9.5□□□□□ -0.89
Gm12887B1AVM1 S100pbp-203ENSMUST00000106059 4084 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Gm12887B1AVM1 Brat1-201ENSMUST00000041588 3333 ntAPPRIS P3 TSL 1 (best) BASIC9.5□□□□□ -0.89
Gm12887B1AVM1 Lactb2-201ENSMUST00000027071 4494 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Gm12887B1AVM1 Loxhd1-202ENSMUST00000096547 6595 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Gm12887B1AVM1 Gm14005-209ENSMUST00000224993 1832 ntBASIC9.5□□□□□ -0.89
Gm12887B1AVM1 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Gm12887B1AVM1 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC9.5□□□□□ -0.89
Gm12887B1AVM1 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC9.5□□□□□ -0.89
Gm12887B1AVM1 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Gm12887B1AVM1 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Gm12887B1AVM1 Spesp1-201ENSMUST00000056949 3042 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Gm12887B1AVM1 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC9.5□□□□□ -0.89
Gm12887B1AVM1 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC9.5□□□□□ -0.89
Gm12887B1AVM1 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC9.5□□□□□ -0.89
Gm12887B1AVM1 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Gm12887B1AVM1 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Gm12887B1AVM1 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC9.5□□□□□ -0.89
Gm12887B1AVM1 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC9.5□□□□□ -0.89
Gm12887B1AVM1 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC9.5□□□□□ -0.89
Gm12887B1AVM1 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Gm12887B1AVM1 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC9.5□□□□□ -0.89
Gm12887B1AVM1 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC9.5□□□□□ -0.89
Gm12887B1AVM1 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC9.5□□□□□ -0.89
Gm12887B1AVM1 Zfp384-206ENSMUST00000112425 2691 ntTSL 5 BASIC9.5□□□□□ -0.89
Gm12887B1AVM1 AC153506.1-201ENSMUST00000218768 2915 ntBASIC9.5□□□□□ -0.89
Gm12887B1AVM1 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC9.5□□□□□ -0.89
Gm12887B1AVM1 Zfp93-201ENSMUST00000032696 2324 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Gm12887B1AVM1 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Gm12887B1AVM1 Hectd4-201ENSMUST00000042614 15482 ntAPPRIS P1 TSL 5 BASIC9.5□□□□□ -0.89
Gm12887B1AVM1 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Gm12887B1AVM1 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC9.5□□□□□ -0.89
Gm12887B1AVM1 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Gm12887B1AVM1 Arhgap11a-202ENSMUST00000110947 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC9.5□□□□□ -0.89
Gm12887B1AVM1 Mettl14-204ENSMUST00000174323 4202 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Gm12887B1AVM1 Fbxo43-201ENSMUST00000058643 4035 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Gm12887B1AVM1 9030624J02Rik-202ENSMUST00000059390 5097 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Gm12887B1AVM1 Map4-206ENSMUST00000169851 3446 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Gm12887B1AVM1 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC9.5□□□□□ -0.89
Gm12887B1AVM1 Kcnk10-201ENSMUST00000110113 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC9.5□□□□□ -0.89
Gm12887B1AVM1 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC9.5□□□□□ -0.89
Gm12887B1AVM1 Crybg3-205ENSMUST00000172910 2870 ntTSL 5 BASIC9.49□□□□□ -0.89
Gm12887B1AVM1 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Gm12887B1AVM1 Ikzf2-202ENSMUST00000187184 2013 ntTSL 5 BASIC9.49□□□□□ -0.89
Gm12887B1AVM1 Ces3a-201ENSMUST00000093222 2046 ntAPPRIS P4 TSL 1 (best) BASIC9.49□□□□□ -0.89
Gm12887B1AVM1 AI854703-201ENSMUST00000095938 3517 ntAPPRIS P1 TSL 2 BASIC9.49□□□□□ -0.89
Gm12887B1AVM1 Limd1-201ENSMUST00000026269 4848 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Gm12887B1AVM1 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC9.49□□□□□ -0.89
Gm12887B1AVM1 Entpd4-201ENSMUST00000064831 1842 ntAPPRIS P1 TSL 5 BASIC9.49□□□□□ -0.89
Gm12887B1AVM1 Lima1-201ENSMUST00000073691 4215 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Gm12887B1AVM1 Isl1-201ENSMUST00000036060 2516 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Gm12887B1AVM1 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Gm12887B1AVM1 Slc10a6-201ENSMUST00000031263 2124 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Gm12887B1AVM1 Slc38a3-201ENSMUST00000010208 2585 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Gm12887B1AVM1 C2cd5-213ENSMUST00000204655 3526 ntAPPRIS P1 TSL 5 BASIC9.49□□□□□ -0.89
Gm12887B1AVM1 Vwa5b2-207ENSMUST00000159780 4042 ntAPPRIS ALT2 TSL 5 BASIC9.49□□□□□ -0.89
Gm12887B1AVM1 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Gm12887B1AVM1 Zfp174-201ENSMUST00000041778 5897 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Gm12887B1AVM1 Mageb4-202ENSMUST00000113969 2403 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Gm12887B1AVM1 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC9.49□□□□□ -0.89
Gm12887B1AVM1 Gm14999-201ENSMUST00000121039 624 ntBASIC9.49□□□□□ -0.89
Gm12887B1AVM1 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC9.49□□□□□ -0.89
Gm12887B1AVM1 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Gm12887B1AVM1 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC9.49□□□□□ -0.89
Gm12887B1AVM1 Rprl1-201ENSMUST00000158050 327 ntBASIC9.49□□□□□ -0.89
Gm12887B1AVM1 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Gm12887B1AVM1 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC9.49□□□□□ -0.89
Gm12887B1AVM1 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Gm12887B1AVM1 Gm27023-201ENSMUST00000182372 285 ntBASIC9.49□□□□□ -0.89
Gm12887B1AVM1 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC9.49□□□□□ -0.89
Gm12887B1AVM1 Lect2-202ENSMUST00000225183 823 ntBASIC9.49□□□□□ -0.89
Gm12887B1AVM1 Hbb-y-201ENSMUST00000033229 633 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms