Protein–RNA interactions for Protein: A2AN08

Ubr4, E3 ubiquitin-protein ligase UBR4, mousemouse

Predictions only

Length 5,180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr4A2AN08 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
Ubr4A2AN08 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC6.03□□□□□ -1.44
Ubr4A2AN08 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC6.03□□□□□ -1.44
Ubr4A2AN08 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Ubr4A2AN08 A930003A15Rik-201ENSMUST00000100083 746 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Ubr4A2AN08 Gm15793-201ENSMUST00000121857 495 ntBASIC6.03□□□□□ -1.44
Ubr4A2AN08 Chn1os1-201ENSMUST00000123613 636 ntTSL 3 BASIC6.03□□□□□ -1.44
Ubr4A2AN08 Gm4473-201ENSMUST00000145987 657 ntTSL 2 BASIC6.03□□□□□ -1.44
Ubr4A2AN08 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Ubr4A2AN08 Kcnmb3-201ENSMUST00000164954 1715 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
Ubr4A2AN08 Gm26513-201ENSMUST00000181802 2489 ntBASIC6.03□□□□□ -1.44
Ubr4A2AN08 Mir7221-201ENSMUST00000184009 72 ntBASIC6.03□□□□□ -1.44
Ubr4A2AN08 Gm38034-201ENSMUST00000193915 2069 ntBASIC6.03□□□□□ -1.44
Ubr4A2AN08 Gm42464-202ENSMUST00000198111 774 ntBASIC6.03□□□□□ -1.44
Ubr4A2AN08 Crip1-205ENSMUST00000199089 509 ntTSL 3 BASIC6.03□□□□□ -1.44
Ubr4A2AN08 Gm43458-201ENSMUST00000200791 462 ntTSL 3 BASIC6.03□□□□□ -1.44
Ubr4A2AN08 Gm42732-201ENSMUST00000202887 1197 ntBASIC6.03□□□□□ -1.44
Ubr4A2AN08 AC165249.1-202ENSMUST00000217990 734 ntTSL 3 BASIC6.03□□□□□ -1.44
Ubr4A2AN08 AC160109.1-201ENSMUST00000225592 729 ntBASIC6.03□□□□□ -1.44
Ubr4A2AN08 AC131029.2-203ENSMUST00000228116 1244 ntBASIC6.03□□□□□ -1.44
Ubr4A2AN08 Retreg1-206ENSMUST00000228306 1430 ntBASIC6.03□□□□□ -1.44
Ubr4A2AN08 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Ubr4A2AN08 Serpinb6a-203ENSMUST00000076532 1504 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
Ubr4A2AN08 Boll-201ENSMUST00000087585 882 ntAPPRIS P2 TSL 1 (best) BASIC6.03□□□□□ -1.44
Ubr4A2AN08 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Ubr4A2AN08 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Ubr4A2AN08 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
Ubr4A2AN08 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Ubr4A2AN08 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Ubr4A2AN08 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
Ubr4A2AN08 Mup1-202ENSMUST00000103012 927 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
Ubr4A2AN08 Mup16-202ENSMUST00000107483 927 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Ubr4A2AN08 Mup17-201ENSMUST00000107484 927 ntAPPRIS P1 TSL 2 BASIC6.03□□□□□ -1.44
Ubr4A2AN08 Gm13543-201ENSMUST00000121230 796 ntBASIC6.03□□□□□ -1.44
Ubr4A2AN08 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
Ubr4A2AN08 Mir8091-201ENSMUST00000183602 139 ntBASIC6.03□□□□□ -1.44
Ubr4A2AN08 Hesx1-201ENSMUST00000035433 1141 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Ubr4A2AN08 Ccr8-201ENSMUST00000048777 1175 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Ubr4A2AN08 Mup2-201ENSMUST00000074700 927 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Ubr4A2AN08 Mup7-201ENSMUST00000079697 927 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
Ubr4A2AN08 Mup19-201ENSMUST00000080606 927 ntAPPRIS P2 TSL 1 (best) BASIC6.03□□□□□ -1.44
Ubr4A2AN08 Gm37795-201ENSMUST00000194216 2459 ntBASIC6.03□□□□□ -1.44
Ubr4A2AN08 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
Ubr4A2AN08 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Ubr4A2AN08 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Ubr4A2AN08 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Ubr4A2AN08 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Ubr4A2AN08 Olfr464-205ENSMUST00000217112 2232 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
Ubr4A2AN08 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Ubr4A2AN08 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Ubr4A2AN08 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
Ubr4A2AN08 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
Ubr4A2AN08 Gm44740-201ENSMUST00000205603 1614 ntBASIC6.03□□□□□ -1.44
Ubr4A2AN08 Rab3c-202ENSMUST00000223922 2398 ntBASIC6.03□□□□□ -1.44
Ubr4A2AN08 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
Ubr4A2AN08 AC122273.1-201ENSMUST00000213634 2327 ntBASIC6.03□□□□□ -1.44
Ubr4A2AN08 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC6.03□□□□□ -1.44
Ubr4A2AN08 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Ubr4A2AN08 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Ubr4A2AN08 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Ubr4A2AN08 Hars2-206ENSMUST00000152954 3336 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Ubr4A2AN08 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC6.03□□□□□ -1.44
Ubr4A2AN08 Slc24a5-201ENSMUST00000070353 1954 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Ubr4A2AN08 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Ubr4A2AN08 Elavl2-206ENSMUST00000107116 1282 ntTSL 5 BASIC6.03□□□□□ -1.44
Ubr4A2AN08 Gm15353-201ENSMUST00000110860 702 ntTSL 5 BASIC6.03□□□□□ -1.44
Ubr4A2AN08 Zfp961-204ENSMUST00000136516 601 ntTSL 2 BASIC6.03□□□□□ -1.44
Ubr4A2AN08 Gm27833-201ENSMUST00000184285 124 ntBASIC6.03□□□□□ -1.44
Ubr4A2AN08 Gm42997-201ENSMUST00000196074 918 ntTSL 3 BASIC6.03□□□□□ -1.44
Ubr4A2AN08 Gm35177-201ENSMUST00000216525 623 ntTSL 3 BASIC6.03□□□□□ -1.44
Ubr4A2AN08 CT025538.1-201ENSMUST00000223638 369 ntBASIC6.03□□□□□ -1.44
Ubr4A2AN08 Cox7a1-201ENSMUST00000098594 393 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Ubr4A2AN08 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Ubr4A2AN08 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Ubr4A2AN08 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
Ubr4A2AN08 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Ubr4A2AN08 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
Ubr4A2AN08 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC6.03□□□□□ -1.44
Ubr4A2AN08 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Ubr4A2AN08 Tmem29-212ENSMUST00000173996 1433 ntAPPRIS P1 TSL 2 BASIC6.02□□□□□ -1.44
Ubr4A2AN08 Tmem29-201ENSMUST00000059256 1402 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.44
Ubr4A2AN08 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Ubr4A2AN08 Gm44975-201ENSMUST00000207435 1390 ntBASIC6.02□□□□□ -1.45
Ubr4A2AN08 Msl1-202ENSMUST00000037930 1303 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Ubr4A2AN08 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
Ubr4A2AN08 Gm15329-201ENSMUST00000121408 155 ntBASIC6.02□□□□□ -1.45
Ubr4A2AN08 Gm5578-201ENSMUST00000121490 1236 ntBASIC6.02□□□□□ -1.45
Ubr4A2AN08 Rps16-ps2-201ENSMUST00000140155 441 ntBASIC6.02□□□□□ -1.45
Ubr4A2AN08 Atp5e-201ENSMUST00000016396 421 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Ubr4A2AN08 Gm23694-201ENSMUST00000179335 110 ntBASIC6.02□□□□□ -1.45
Ubr4A2AN08 Ift172-206ENSMUST00000201809 405 ntTSL 5 BASIC6.02□□□□□ -1.45
Ubr4A2AN08 Tbc1d7-204ENSMUST00000220787 892 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Ubr4A2AN08 AC124450.1-201ENSMUST00000225569 495 ntBASIC6.02□□□□□ -1.45
Ubr4A2AN08 Ssna1-201ENSMUST00000028342 862 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Ubr4A2AN08 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Ubr4A2AN08 Ms4a6b-201ENSMUST00000025580 1687 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Ubr4A2AN08 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
Ubr4A2AN08 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC6.02□□□□□ -1.45
Ubr4A2AN08 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC6.02□□□□□ -1.45
Ubr4A2AN08 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms